Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03344 ATGTCTAGCTCTACAAAAGTGTTGGAACCAGCATTCCAAGGAGTAGGCCAAAAAGTAGGGACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCATTGCCGAAATCTGATTATGGGAAATTCTACATGGGAGATTCTTACATCATCTTGCAGACAACACAAGGCAAAGGAGGCAGTTACTTGTATGATATTCACTTCTGGATTGGAAAGGATACAAGTCAGGATGAAGCTGGAACTGCAGCCATTAAAACTATTGAACTTGATGCATCCCTTGGTGGACGTGCAGTGCAGCACAGGGAAATCCAAGGGCATGAATCTGACAAGTTTTTGTCATACTTTAAGCCATGTATTATACCATTAGAAGGAGGTGTTGCATCTGGTTTCAAAACACCAGAAGAGGAGGTGTTTGAAACACGTTTGTATGTATGCAAAGGAAAACGAGTTGTTAGAATAAAACAGGTCCCTTTTGTACGGTCTTCGCTGAATCATGATGATGTATTCATCTTAGACACTAAGGATAAGATTTATCAATTCAATGGAGCAAATTCCAATATTCAAGAAAGAGCCAAGGCTTTGGAAGTTATTCAGTTATTGAAAGAAAAGTATCATGAAGGGACATGCAATGTTGCAATTGTTGATGATGGAAAGTTGGATACTGAGTCAGACTCGGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGAAAGAAGGTAATCAGTGAAGATGATATTGTTCCAGAGACAACTCCTGCTAAACTATATAGTATTGCTGATGGTGAGGTCAAGTCAGTGGATGGTGAACTTTCTAAGTCACTGTTGGAGAACAGCAAATGCTATTTATTGGACTGTGGTGCTGAGATATTTGTCTGGGTTGGCCGTGTAACACAAGTTGATGAAAGAAAAGCAGCATGTCAAGCTGCTGAGGACTTTGTTGCAAGTCAAAAAAGGCCAAAAGCTACAAGGATAACAAGGGTTATTCAAGGCTATGAGACACATTCATTTAAATCCAACTTTGATTCTTGGCCATCCGGTTCTGCTTCTACTGCTGGTGCTGAGGAAGGAAGAGGAAAAGTTGCAGCTTTGCTGAAGCAACAAGGTATGGGTGTCAAGGGAGCGGCAAAAAGTGCCCCAGTTACTGAGGAAATTCCACCTTTGCTTGAAGGAGGTGGAAAATTGGAGGTATGGATAATCAATGGAAGTGCTAAGACTCCATTACCTAAGGAGGATATTGGTAAATTTTATGGTGGAGATTGTTACATAGTGTTGTACACTTATCACTCTGGTGAGAGGAAGGAAGACTACTTTTTGTGCTCTTGGTTTGGAAAAAACAGCATTGAGGAGGACCGGAAGATGGCTACTCGGTTGGCTACTACAATGTCCAACTCACTAAAGGGTAGACCTGTTCAGGGACGCCTATTTGATGGTAAAGAATCACCACAGTTTGTTGCCCTTTTCCAACCTATGGTGGTCCTCAAGGGTGGTGTGAGCTCTGGctacaaaaaattaattgcaGATAAAGGTTTGGCAGATGAGACATACACACCAGAGGGTATTGCTCTTATTAGGATTTCTGGAACATCCATtcacaataataaaacaatgCAAGTTGATGCAGTAGCGACTTCGTTGAATTCTACCGAGTGTTTTCTTCTGCAATCTGGCTCAACAATTTTTAATTGGCATGGCAATCAATCTTCCATTGAGCAGCATCAGCTTGCAGCAAAAGTTGCTGAATTTTTAAGGCCAGGAGTTGCTTTAAAGCATGCAAAAGAAGGAACAGAAACCTCAGCTTTCTGGTTTGCTGTTGGAGGAAAACAAAGTATCACTAGCAAAAAAGTCACTAATGATGTTGTCAGAGACCCACATTTGTTCACTTTATCATTTAATAAAGCGGGAAAGCTACAGGAAGAAGAGATTTTCAACTTTGGCCAGGATGATCTGTTAACAGAGGATATCCTCATTCTCGACACACATGCAGAAGTGTTTGTTTGGATTGGTCAGAATGTGGACGCAAAAGAAAAGCAAAATGCTTTTGAAATTGCCCAGAAATACATAGATAAGGCTGGATCTCTGGAGGGACTATCTCCTTATGTACCGCTATATAAAGTAACAGAAGGGAACGAACCTTGCTTTTTCACAACATACTTTTCTTGGGATCATGCAAAAGCTACGATTCAAGGGAACTCATTCATGAAAAAGATGGCCGTGCTATTTGGAATTGGTCATGCCGTAGAGGATAAATCTAATAATGGATCAAGTCAAGGGGGGGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCTTTAAATAATGCATTCAATTCATCTCCTGAGACACCACCCAGTGCGGATAAATTGAATAGCCTAAATCAAGGAGGACATAGGCAAAGGGCAGAAGCTTTAGCTGCCTTAAACAATGCATTTAGTTCATCATCTGGAACTAAACCTGTTACACCTAGAAAATCTCCAAGAGGTTCAGGATCACAAAGAGCAGCAGCAGTTGCTGCTCTTTCTAATGTTCTCACTGCTGAAAAGAAGACACCTGACAGTTCTCCTGTGGCAACCAGTAGTCCTGTTGTGGAAAGTGACCCTTTTGATGCTACAAGTGAAAGTGTCCCTTCTGAATCGGAAGGTCTTGAAGAAGTTACTGAAACCAAGGAGACAGAGGAACCTGCTTCTGAAACTGGTAGCGATGGAAATTCGGAATCAAAACAAGAAAATGTGGAGGATGGAAATGATggtcaaaataatcaaaaagtCTTCAGTTATGAGCAGTTAAAAGCTAAATCTGGGAGTCATCTATCTGGGGTTGATCTTCAACGCAGGGAGGCTTATCTGTCAGACCAAGAGTTTGAAACTGTATTTGCAATGAAAAAAGAAGCATTCAATAAGTTACCAAAATGGAAGCAAGACATGCtgaaaagaaaatttgatttgttCTAG 2949 0.4039 MSSSTKVLEPAFQGVGQKVGTEIWRIENFQPVPLPKSDYGKFYMGDSYIILQTTQGKGGSYLYDIHFWIGKDTSQDEAGTAAIKTIELDASLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKTPEEEVFETRLYVCKGKRVVRIKQVPFVRSSLNHDDVFILDTKDKIYQFNGANSNIQERAKALEVIQLLKEKYHEGTCNVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIVPETTPAKLYSIADGEVKSVDGELSKSLLENSKCYLLDCGAEIFVWVGRVTQVDERKAACQAAEDFVASQKRPKATRITRVIQGYETHSFKSNFDSWPSGSASTAGAEEGRGKVAALLKQQGMGVKGAAKSAPVTEEIPPLLEGGGKLEVWIINGSAKTPLPKEDIGKFYGGDCYIVLYTYHSGERKEDYFLCSWFGKNSIEEDRKMATRLATTMSNSLKGRPVQGRLFDGKESPQFVALFQPMVVLKGGVSSGYKKLIADKGLADETYTPEGIALIRISGTSIHNNKTMQVDAVATSLNSTECFLLQSGSTIFNWHGNQSSIEQHQLAAKVAEFLRPGVALKHAKEGTETSAFWFAVGGKQSITSKKVTNDVVRDPHLFTLSFNKAGKLQEEEIFNFGQDDLLTEDILILDTHAEVFVWIGQNVDAKEKQNAFEIAQKYIDKAGSLEGLSPYVPLYKVTEGNEPCFFTTYFSWDHAKATIQGNSFMKKMAVLFGIGHAVEDKSNNGSSQGGGPRQRAEALAALNNAFNSSPETPPSADKLNSLNQGGHRQRAEALAALNNAFSSSSGTKPVTPRKSPRGSGSQRAAAVAALSNVLTAEKKTPDSSPVATSSPVVESDPFDATSESVPSESEGLEEVTETKETEEPASETGSDGNSESKQENVEDGNDGQNNQKVFSYEQLKAKSGSHLSGVDLQRREAYLSDQEFETVFAMKKEAFNKLPKWKQDMLKRKFDLF 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03344 982 CDD gelsolin_S5_like 520 610 - -
Tsu07g03344 982 SUPERFAMILY Actin depolymerizing proteins 383 529 - -
Tsu07g03344 982 CDD gelsolin_S4_like 387 488 - -
Tsu07g03344 982 MobiDBLite consensus disorder prediction 881 895 - -
Tsu07g03344 982 Gene3D Severin 617 738 IPR029006 -
Tsu07g03344 982 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Tsu07g03344 982 MobiDBLite consensus disorder prediction 805 827 - -
Tsu07g03344 982 MobiDBLite consensus disorder prediction 774 927 - -
Tsu07g03344 982 CDD gelsolin_S6_like 623 722 - -
Tsu07g03344 982 MobiDBLite consensus disorder prediction 845 880 - -
Tsu07g03344 982 MobiDBLite consensus disorder prediction 912 927 - -
Tsu07g03344 982 SUPERFAMILY Actin depolymerizing proteins 597 720 - -
Tsu07g03344 982 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Tsu07g03344 982 Gene3D Severin 246 358 IPR029006 -
Tsu07g03344 982 SMART VILL_6 519 608 IPR007122 GO:0051015
Tsu07g03344 982 SMART VILL_6 19 117 IPR007122 GO:0051015
Tsu07g03344 982 SMART VILL_6 137 234 IPR007122 GO:0051015
Tsu07g03344 982 SMART VILL_6 252 344 IPR007122 GO:0051015
Tsu07g03344 982 SMART VILL_6 393 491 IPR007122 GO:0051015
Tsu07g03344 982 SMART VILL_6 624 721 IPR007122 GO:0051015
Tsu07g03344 982 PANTHER VILLIN 1 982 IPR007122 GO:0051015
Tsu07g03344 982 PANTHER VILLIN-3-LIKE ISOFORM X1 1 982 - -
Tsu07g03344 982 MobiDBLite consensus disorder prediction 774 796 - -
Tsu07g03344 982 SUPERFAMILY Actin depolymerizing proteins 513 614 - -
Tsu07g03344 982 Pfam Gelsolin repeat 150 217 IPR007123 -
Tsu07g03344 982 Pfam Gelsolin repeat 29 111 IPR007123 -
Tsu07g03344 982 Pfam Gelsolin repeat 537 584 IPR007123 -
Tsu07g03344 982 Pfam Gelsolin repeat 644 715 IPR007123 -
Tsu07g03344 982 Pfam Gelsolin repeat 270 337 IPR007123 -
Tsu07g03344 982 Pfam Gelsolin repeat 406 484 IPR007123 -
Tsu07g03344 982 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Tsu07g03344 982 SUPERFAMILY VHP, Villin headpiece domain 917 982 IPR036886 GO:0003779|GO:0007010
Tsu07g03344 982 Pfam Villin headpiece domain 947 982 IPR003128 GO:0003779|GO:0007010
Tsu07g03344 982 Gene3D Severin 523 613 IPR029006 -
Tsu07g03344 982 CDD gelsolin_S3_like 254 343 - -
Tsu07g03344 982 Gene3D Severin 133 245 IPR029006 -
Tsu07g03344 982 Gene3D Severin 6 132 IPR029006 -
Tsu07g03344 982 CDD gelsolin_S1_like 12 124 - -
Tsu07g03344 982 ProSiteProfiles Headpiece (HP) domain profile. 917 982 IPR003128 GO:0003779|GO:0007010
Tsu07g03344 982 CDD gelsolin_S2_like 138 232 - -
Tsu07g03344 982 Gene3D Villin headpiece domain 903 982 IPR036886 GO:0003779|GO:0007010
Tsu07g03344 982 Gene3D Severin 389 522 IPR029006 -
Tsu07g03344 982 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Tsu07g03344 982 PRINTS Gelsolin family signature 534 554 IPR007122 GO:0051015
Tsu07g03344 982 PRINTS Gelsolin family signature 438 456 IPR007122 GO:0051015
Tsu07g03344 982 PRINTS Gelsolin family signature 647 669 IPR007122 GO:0051015
Tsu07g03344 982 PRINTS Gelsolin family signature 412 428 IPR007122 GO:0051015
Tsu07g03344 982 PRINTS Gelsolin family signature 594 613 IPR007122 GO:0051015
Tsu07g03344 982 PRINTS Gelsolin family signature 676 695 IPR007122 GO:0051015
Tsu07g03344 982 PRINTS Gelsolin family signature 471 491 IPR007122 GO:0051015
Tsu07g03344 982 SMART VHP_1 947 982 IPR003128 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03344 Tsu-Chr7 39930518 39942114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03344 - - gmx:100787208 1608.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03344 07 39930518 39942114 Tsu01g01849 01 18558710 18571556 PCT