Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01849 ATGTCTAGCGCTACAAAGGTTTGGGATCCTGCATTCCAGGGAGCGGGTCAGAGATTAGGAACTGAAATATGGAGGATTGAGAATTTTCAACCGGTTCCATTACCCAAATCTGAATATGGGAAATTCTACATGGGAGATTCATACATCATCTTGCAGACAACACAGGGCAAAGGAGGAgcttattattatgatttacaCTTCTGGATTGGAAAGGATACAAGTCAGGATGAGGCTGGAACAGCAGCCATTAAAGCTGTTGAACTTGATGCAGCTCTTGGAGGAAGAGCTGTGCAGCACAGAGAGATTCAAGGACATGAATCtgacaattttttgtcatattttaGGCCATGTATTGTACCATTAGAGGGGGGTGTTGCATCTGGATTTAGAAAACCTGAAGAGGAGGAGTTTGTAACACGTTTGTATGTATGTAGAGGGAAAAGAGTTGTCAGAATGAGACAGATCCCGTTTGCAAGGTCCTCATTGAACCATGATGATGTGTTCATTCTTGACACACAAAATAAGATTTATCAATTCAATGGTGCAAATTCCAGCATTCAGGAAAGAGCCATGGCTTTAGAAGTTGTACAGTTTCTGAAAGAAGAATATCATGAAGGGAAATGTGATGTTGCAATTGTTGATGATGGAAAGTTAGACACTGAGTCGGATTCAGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTTCAAAGAAGGTAATCAGTGAGGATGATGTCATTCCAGAGGCAATTTCTGCTCAGCTATATAGTATCATTGATGGTGAAGTCAAGTCTGTGGAAGGTGAACTTTCTAAATCACTGTTGGAGAACAACAAATGCTATTTACTGGACTGTGGTTCCGAATTATATATCTGGTTTGGCCGGGTAACACAAGTTGAAGAACGAAAAGCAGCTTGCCAAGCAGCTGACGAGTTTGTTTCAAGCCAAAATAGGCCAAAATCTACAAAGATAACAAGGATTACTCAAGGTCATGAGACACGTTCATTTAAGTCCAACTTTGATTCTTGGTCATCGGGATCTGCTGGTACTGTTGCCGACGATGGAAGAGGGAAAGTTTCAGCATTGCTTAAGCAGCAAGGGATAGGTGTCAAAGGAATGCCAAAAGGTACCCCTGTAAATGAGGATCTACCACATTTGCTTGAAGAAGGTGGAAAGATGGAGGTATGGCAAATCAATGGAGATGATAAGACCTCATTGCCGAATGAGGATATTGGTAAATTTCATAGTGGAGATTGTTACATTGTAATGTACACATACCATTCTGGTGAGAGGAAAGAAGATTACTTCTTGTGCTGCTGGTTTGGCAAAGACAGCGTTGAGgAGGACCAAACAACGGCTCTTCAGTTGACTAATACTATGTCCAACTCTTTGAAGGGTAGACCTGTTCAGGGTCGCATATATGAAGGTAAAGAGTCACCACAATTTGTTGCTCTTTTCCAACCCATGGTAGTCCTTAAGGGAGGTTTGAGCACTGGATACAAAACATTCATAACAGACAAAGGTTTATCCGATGAGACATACACGGAAAAATCTATTGCACTTATCCGAATTTCTGGAACTGCCATCCATAACAATAAGGCAGTGCAAGTTGATGCAGTGCCATCGTCATTGAATTCTACAGAATGTTTTGTCTTGCAAACTAGCTCAACAATTTTCACTTGGCATGGGAATCAGTGTTCCCATGAACAGCAGCAGCAAGCAGCAAAGGTTGCAGAATTTTTAAGGCCAGGAGTTGCTTCAAAGCATGCTAAAGAAGGTACAGAGAACTCAGCTTTCTGGCTTGCACTAGGAGGAGAAAAACAAAGTTACAGCAGCAAGAAAGTAATAAATGAGGTTATTCGAGATCCACATCTTTTCACCTTATCATTTTCTAAAGGAAAGTTACATGTAGAGGAGATTTACAACTTCTCCCAAGATGATTTGTTAACAGAGGATATCCACGTACTTGACACACACGCAGAAGTGTTTCTTTGGATTGGTCAGTCTGTTGATCCAAAAGATAAGCAAGATGCTTTTGAAATTGGTCAGAAATACATAGATATGACTGCATCTCTGGAAGGACTATCTCCGCGTGTACCCTTATATAAAATCACAGAAGGGAACGAACCTTTCTTTTTCACAACATACTTTTCATGGGATTGGGATTATACAAGAGCTAAGATTCTTGGGAACTCATTTCAGAAAAAGGTGTCGATATTCTTTACGATTGGCCATGACTTGGAGGATAAATCAAATGAGTCAAGTGGAGGGGGACCTAGACAAAGGGCAGAAGCTTTGGCTGCTTTAACTTCTGCTTTTAACTCATCGTCTGAGAAAACGACGAGTATGACACATGAGAGATTGAATGAGTTAATCCAAGGAGGACCAAGACAAAGAGCGGAAGCTTTAGCTGCTTTAAACTCTGCATTTAAGTCTTCATCAGTGACAAAGAAAGTTACTCCTAGGCCATCTGCAAAAGGTCAAGGATCACAAAGAGCAGCCGCTGTAGCTGCTCTTTCATCAGTTCTTACAGCTGAGAACAAACAATCACCCGATGCCTCTCCTGTGGCACCCCGCAGTCCTATTCCAGAGGAAACTGAAATGGATGAAGCTACAGAAGCCAAGGAAACGGAAGATGTTTCTGAATCTGAACATGAAAATGTGGAGGATGGAAACAATGACCAAAGTAGTCAAATAACATTCAGTTATGACGAGTTAAAGACTACATCGGGCAATAATGTGTCTGGAATTGATCATAAAAGGAGAGAGGCCTATCTGTCAGATGAAGAATTCCTAACTGTATTTGGAATGGTAAAAGAAGACTTTTATAAATTGCCAAGATGGAAGCAAGAAATGCTGAAAAAGAAATTGGAATTGTTCTAG 2886 0.4058 MSSATKVWDPAFQGAGQRLGTEIWRIENFQPVPLPKSEYGKFYMGDSYIILQTTQGKGGAYYYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQGHESDNFLSYFRPCIVPLEGGVASGFRKPEEEEFVTRLYVCRGKRVVRMRQIPFARSSLNHDDVFILDTQNKIYQFNGANSSIQERAMALEVVQFLKEEYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPISKKVISEDDVIPEAISAQLYSIIDGEVKSVEGELSKSLLENNKCYLLDCGSELYIWFGRVTQVEERKAACQAADEFVSSQNRPKSTKITRITQGHETRSFKSNFDSWSSGSAGTVADDGRGKVSALLKQQGIGVKGMPKGTPVNEDLPHLLEEGGKMEVWQINGDDKTSLPNEDIGKFHSGDCYIVMYTYHSGERKEDYFLCCWFGKDSVEEDQTTALQLTNTMSNSLKGRPVQGRIYEGKESPQFVALFQPMVVLKGGLSTGYKTFITDKGLSDETYTEKSIALIRISGTAIHNNKAVQVDAVPSSLNSTECFVLQTSSTIFTWHGNQCSHEQQQQAAKVAEFLRPGVASKHAKEGTENSAFWLALGGEKQSYSSKKVINEVIRDPHLFTLSFSKGKLHVEEIYNFSQDDLLTEDIHVLDTHAEVFLWIGQSVDPKDKQDAFEIGQKYIDMTASLEGLSPRVPLYKITEGNEPFFFTTYFSWDWDYTRAKILGNSFQKKVSIFFTIGHDLEDKSNESSGGGPRQRAEALAALTSAFNSSSEKTTSMTHERLNELIQGGPRQRAEALAALNSAFKSSSVTKKVTPRPSAKGQGSQRAAAVAALSSVLTAENKQSPDASPVAPRSPIPEETEMDEATEAKETEDVSESEHENVEDGNNDQSSQITFSYDELKTTSGNNVSGIDHKRREAYLSDEEFLTVFGMVKEDFYKLPRWKQEMLKKKLELF 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01849 961 CDD gelsolin_S6_like 623 723 - -
Tsu01g01849 961 Gene3D Severin 252 352 IPR029006 -
Tsu01g01849 961 Gene3D Severin 6 132 IPR029006 -
Tsu01g01849 961 MobiDBLite consensus disorder prediction 835 855 - -
Tsu01g01849 961 SMART VILL_6 252 344 IPR007122 GO:0051015
Tsu01g01849 961 SMART VILL_6 518 607 IPR007122 GO:0051015
Tsu01g01849 961 SMART VILL_6 392 490 IPR007122 GO:0051015
Tsu01g01849 961 SMART VILL_6 19 117 IPR007122 GO:0051015
Tsu01g01849 961 SMART VILL_6 625 720 IPR007122 GO:0051015
Tsu01g01849 961 SMART VILL_6 139 234 IPR007122 GO:0051015
Tsu01g01849 961 SUPERFAMILY Actin depolymerizing proteins 616 725 - -
Tsu01g01849 961 SUPERFAMILY VHP, Villin headpiece domain 896 961 IPR036886 GO:0003779|GO:0007010
Tsu01g01849 961 MobiDBLite consensus disorder prediction 813 899 - -
Tsu01g01849 961 Gene3D Severin 133 247 IPR029006 -
Tsu01g01849 961 Gene3D Villin headpiece domain 882 961 IPR036886 GO:0003779|GO:0007010
Tsu01g01849 961 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Tsu01g01849 961 Gene3D Severin 386 519 IPR029006 -
Tsu01g01849 961 SUPERFAMILY Actin depolymerizing proteins 384 528 - -
Tsu01g01849 961 CDD gelsolin_S4_like 386 487 - -
Tsu01g01849 961 SMART VHP_1 926 961 IPR003128 GO:0003779|GO:0007010
Tsu01g01849 961 PANTHER VILLIN-3-LIKE ISOFORM X1 1 961 - -
Tsu01g01849 961 ProSiteProfiles Headpiece (HP) domain profile. 896 961 IPR003128 GO:0003779|GO:0007010
Tsu01g01849 961 SUPERFAMILY Actin depolymerizing proteins 134 241 - -
Tsu01g01849 961 SUPERFAMILY Actin depolymerizing proteins 510 607 - -
Tsu01g01849 961 CDD gelsolin_S5_like 518 609 - -
Tsu01g01849 961 Pfam Villin headpiece domain 926 961 IPR003128 GO:0003779|GO:0007010
Tsu01g01849 961 Pfam Gelsolin repeat 267 337 IPR007123 -
Tsu01g01849 961 Pfam Gelsolin repeat 532 583 IPR007123 -
Tsu01g01849 961 Pfam Gelsolin repeat 29 111 IPR007123 -
Tsu01g01849 961 Pfam Gelsolin repeat 410 483 IPR007123 -
Tsu01g01849 961 Pfam Gelsolin repeat 150 217 IPR007123 -
Tsu01g01849 961 Gene3D Severin 618 735 IPR029006 -
Tsu01g01849 961 MobiDBLite consensus disorder prediction 813 828 - -
Tsu01g01849 961 CDD gelsolin_S3_like 254 343 - -
Tsu01g01849 961 Gene3D Severin 520 613 IPR029006 -
Tsu01g01849 961 SUPERFAMILY Actin depolymerizing proteins 223 352 - -
Tsu01g01849 961 CDD gelsolin_S1_like 12 124 - -
Tsu01g01849 961 PANTHER VILLIN 1 961 IPR007122 GO:0051015
Tsu01g01849 961 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Tsu01g01849 961 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Tsu01g01849 961 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Tsu01g01849 961 PRINTS Gelsolin family signature 675 694 IPR007122 GO:0051015
Tsu01g01849 961 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Tsu01g01849 961 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Tsu01g01849 961 PRINTS Gelsolin family signature 646 668 IPR007122 GO:0051015
Tsu01g01849 961 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Tsu01g01849 961 CDD gelsolin_S2_like 138 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01849 Tsu-Chr1 18558710 18571556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01849 - - gmx:100788765 1553.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03344 07 39930518 39942114 Tsu01g01849 01 18558710 18571556 PCT