Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03318 ATGGTGGGAAGCATTTTAGGAAAGATTAATAGTAACACATACTCAAATGGGTCATCTCAGAATCATAATAATGGATTAGAGGATAAGCTTGATGAGTTTAGGAGATTAATTGGAAAAACTAATGGTGATCCATTAAGAATTGTGAGTGTTGGAGCTGGTGCTTGGGGAAGTGTTTTTGCAGCACTTTTACAAGACACTTATGGTGAATTTAGAGATAAAATACAAATCAGAATATGGAGAAGATCAGGAAGAAAAGTTGATAGAGAAACTGCTAAACATCTCTTTGAAGTTATTAATTCAAGAGAAGATGTTTTAAGAAGGTTGATAAGAAATTGTGCTTATCTAAAATATGTTGAAGCAAGACTTGGTGATAGGACATTATTTGCTGATGAGATTCTTAAAGATGGTCTTTGTTTGAATATGATTGATACTCCTGTTTGTCCTTTGAAAGTTGTTACTAATTTACAAGAAGCTGTTTGGGATGCTGATATTGTTGTTAATGGTTTGCCTTCGACCGAAACTCGAGAGATTTTTGAAGAGATTAGTAAGTATTGGAAGGAGAGGATTAGTGTTCCTATTATAATTTCTTTGTCTAAAGGTATTGAAGCTGCATTGGAGCCTCTTCCTCATATTGTAACTCCTACAAAAATGATTCATCAAGCAACTGGAGTGCCTATGGAGAACATACTTTATCTTGGTGGTCCAAATATTGCCTCAGAAATCTACAACAAGGAGTATGCAAATGCTAGAATTTGTGGAGCTGAGAAATGGAGAAAACCTTTAGCAAAGTTTCTTAGACAACCACATTTTATTGTATGGGACAATAGTGACCTTGTTACTCATGAGGTCATGGGTGGATTGAAAAATGTCTATGCAATTGGAGCTGGAATGGTTGCATCCCTTACCAATGAGAGTGCTACAAGCAAATCAGTGTATTTTGCACACTGCACTTCTGAGATGATATTCATCACTCACTTGTTAACCGAAGAGCCTGAGAAACTTGCTGGTCCATTACTAGCTGATACTTATGTGACATTGCTAAAAGGTCGTAACGCGTGGTATGGTCAGATGTTAGCTAAGGGTGAACTAAGCCCTGACATGGGTGTCAACATTAGTGGCAAAGGAATGATTCAGGGAGTATCTGCAGTGGAAGCATTCTTTCAACTTTTGAGTCAATCAAGCCTGAATGTGTTGCATCCTGAAGAAAAAAAGCATGTTGCTCCTGTTGAGCTCTGTCCTATCTTGAAGACACTCTACAAAATATTGATATTAAGGGAACAATCAACACAAGCTATTCTGAAAGCTCTGAGGGATGAAAATCTGAATGATCCGCGAGAACGTATTGCGATTGCACAAAGTCATGCTTTCTACAGACCTTCACTTCTTGGACAACAATGA 1398 0.3748 MVGSILGKINSNTYSNGSSQNHNNGLEDKLDEFRRLIGKTNGDPLRIVSVGAGAWGSVFAALLQDTYGEFRDKIQIRIWRRSGRKVDRETAKHLFEVINSREDVLRRLIRNCAYLKYVEARLGDRTLFADEILKDGLCLNMIDTPVCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERISVPIIISLSKGIEAALEPLPHIVTPTKMIHQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVASLTNESATSKSVYFAHCTSEMIFITHLLTEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGELSPDMGVNISGKGMIQGVSAVEAFFQLLSQSSLNVLHPEEKKHVAPVELCPILKTLYKILILREQSTQAILKALRDENLNDPRERIAIAQSHAFYRPSLLGQQ 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03318 465 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 49 66 IPR006168 GO:0004367|GO:0006072|GO:0009331
Tsu07g03318 465 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 270 294 IPR006168 GO:0004367|GO:0006072|GO:0009331
Tsu07g03318 465 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 149 251 IPR011128 GO:0016616|GO:0046168|GO:0051287
Tsu07g03318 465 Gene3D - 277 437 IPR013328 GO:0016491
Tsu07g03318 465 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 1 464 - -
Tsu07g03318 465 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 277 IPR036291 -
Tsu07g03318 465 Gene3D - 27 117 - -
Tsu07g03318 465 Gene3D - 138 273 - -
Tsu07g03318 465 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 277 427 IPR008927 -
Tsu07g03318 465 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 1 464 - -
Tsu07g03318 465 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 277 431 IPR006109 GO:0004367|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03318 Tsu-Chr7 39600532 39604090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03318 1 464 Acyl Lipid Metabolism Gene Families AT2G41540 86.422 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03318 K00006 - gmx:100810871 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03318 07 39600532 39604090 Tsu07g03318 07 39600532 39604090 ECH
Tsu07g03318 07 39600532 39604090 Tsu01g01826 01 18337897 18341410 PCT