Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01826 ATGGGTGTAATTAGTAattcagactctgatggatctGTTCAGAATTGTATCAATGGCTTAGAGGAGAAACTTGACGAACTTCGCGGTCTTCTTGGTAAGACTAATGGTGATCCATTAAGGATAGTGAGTGTTGGAGCTGGTGCTTGGGGGAGTGTTTTTACAGCATTGTTACAAGACACTTTTGGACAATTCCGCGATAAAGTGCAAATTAGGATATGGAGAAGGCCGTCAAAGATTGTTGATAAAGCAACTGCTAAGCATTTGTTTGAAGTTATCAATTCTAGGGAGGATGTGTTGAGGAGGTTGATTCGGCGTTGCGCTTATTTGAAATATGTTGAAGCAAGGCTTGGTGATAGGACATTATTTGCTGATGAGATTCTAAAAGATGGGTTTTGTTTGAATATGATTGATACACCAATTTGTCCTTTGAAGGTTGTTACAAATTTGCAGGAAGCTGTTTGGGATGCTGATATTGTTGTCAATGGATTGCCTTCGACAGAAACGCGTGAGATTTTTGAAGAGATTAGTAAATATTGGAAGGAGAGAATCACAGTGCCTGTAATAATTTCTTTGGCAAAGGGTATAGAAGCTGCATTGGAGCCTGTTCCTCATATTATAACTCCCACAAAAATGATTCACCAAGCAACTGGAGTTCCCATGGAGAACATACTTTATCTTGGTGGTCCAAATATTGCATCAGAAATCTACCACAAGGAGTATGCCAATGCTAGAATATGTGGTGCTGAGAAATGGAGGAAGCCTCTCGCAAAGTTTCTGAGACAACCACATTTTATTGTTTGGGACAACAGTGACCTTGTCACCCATGAGGTCATGGGTGGCTTGAAAAATGTTTATGCGATCGGTGCTGGAATGGTAGCAGCCCTTACCAATGAGAGTGCCACCAGCAAATCAGTATATTTTGCACACTGTACATCAGAGATGATATTTATCACTCACCTGTTGTCTGAAGAACCTGAAAAACTCGCGGGACCATTATTGGCTGATACTTATGTGACTCTATTGAAAGGCCGTAATGCATGGTACGGCCAAATGCTAGCTAAGGGAGAATTAAGTCCTGACATGGGTGATAGCATAAGAGGCAAAGGAATGATTCAGGGTGTCTCTGCAGTAGAGGCTTTCTTTGAACTTTTGAGCCAATCAAGCCTGAATGTGTTGCACCCTGAAGAGAACAAGCCTGTTGCTCCTGTTGAGCTCTGTCCAATCTTGAAGACACTATATACAATATTAATATCCAGGGAGCAATCAACAAAAGCTATTCTTCAAGCTCTGAGGGATGAAAATTTGAACGATCCGCGTGAACGTATTGAGATTGCACAAAGCCATGCATTCTACAGGCCTTCACTTCTTGGACAGCCTTGA 1380 0.4094 MGVISNSDSDGSVQNCINGLEEKLDELRGLLGKTNGDPLRIVSVGAGAWGSVFTALLQDTFGQFRDKVQIRIWRRPSKIVDKATAKHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLFADEILKDGFCLNMIDTPICPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPVIISLAKGIEAALEPVPHIITPTKMIHQATGVPMENILYLGGPNIASEIYHKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLSEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGELSPDMGDSIRGKGMIQGVSAVEAFFELLSQSSLNVLHPEENKPVAPVELCPILKTLYTILISREQSTKAILQALRDENLNDPRERIEIAQSHAFYRPSLLGQP 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01826 459 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 39 271 IPR036291 -
Tsu01g01826 459 Coils Coil 17 37 - -
Tsu01g01826 459 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 43 60 IPR006168 GO:0004367|GO:0006072|GO:0009331
Tsu01g01826 459 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 264 288 IPR006168 GO:0004367|GO:0006072|GO:0009331
Tsu01g01826 459 Gene3D - 134 267 - -
Tsu01g01826 459 Gene3D - 22 102 - -
Tsu01g01826 459 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 9 459 - -
Tsu01g01826 459 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 271 426 IPR008927 -
Tsu01g01826 459 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 9 459 - -
Tsu01g01826 459 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 271 425 IPR006109 GO:0004367|GO:0005975
Tsu01g01826 459 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 143 245 IPR011128 GO:0016616|GO:0046168|GO:0051287
Tsu01g01826 459 Gene3D - 271 431 IPR013328 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01826 Tsu-Chr1 18337897 18341410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01826 9 459 Acyl Lipid Metabolism Gene Families AT2G41540 87.140 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g01826 K00006 - gmx:100794592 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03318 07 39600532 39604090 Tsu01g01826 01 18337897 18341410 PCT