Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03160 ATGCCAATTTTGGTGACACAACACAAGTGTGGTGGTGTTACCATGATTGGGAATAGATATCAACAATCTGACTCTCCTCCTTATGGAGGTGGGACCCACAATATGAGACCTAGGAGACTCTATCAAGTTTGGAGAGGAGGCAATAAGTTTCTCTGTGGTGGAAGACTGGTTTTTGGTCCTGATGTAGCTTCCTTGTTTCTTACGACGTTCCTAATTGCTGCACCTGCATTTACATTTTGTATTAAGATGTATCTTAAATTCAGGAATGAGAAGGCCACCGTCGGTCATTCTTTTTGGTGGCCTGTAATGATCGGGGGTCTAGTTCTCACTTTTCTGGATTTCTTATTCCTCTTATTGACTTCTGGGAGAGATCCTGGAATTATCCCTAGAAATTCAACACCTCCTGAATATGAAGATGCGTTTAATATACCTACTCCTTCCATGGAATGGATTAATGGTTCGACCCCTCATCTGAAACTACCTCGAACTAAAGATGTAATGGTTAATGGTCACACAGTGAAGGTGAAATTCTGTGATACATGCTTGCTTTATCGACCCCCTCGTACTTCTCATTGTTCTATATGCGACAATTGTATCCAGAGATTTGATCATCACTGTCCTTGGGTTGGCCAGTGTATTGGAAGACGAAACTATCGGCACTTCTTCATGTTTATTTCAACATCAACCATTTTGTGCTTATATGTCTTTGTGTTCTCTTGGATCAATCTTTCCGAGAGTGGTGTTTTGGAAGCACTCTCGCATGATTATGTATCAGATCTTCTCATTATATATTGCTTCATTGCTGTCTGGTTTGTTGGTGGCCTCACCGCTTTCCATTTCTATCTCATTTGTACAAACCAGACAACTTATGAGAACTTCCGGTACCAATATGATAAAAAGGGGAATCCATACAATAAGGGATCACTGAAAAATATCAGAGAAACACTTTGTTCCAGTATTCCCCCGTCAAGGAATAATTTCCGATCATTTGTACAGCTAGATGAACATATGACAGTTGGGTCGTTGACTCCGAATAATGTACATGGAATTTTGACTCCAAAGGAGAAAATTGACGTTGAAATGGGATCTATGCATACAGACGGTCGTGGTTATCCAATTCCCGAGCTTCTGCGAAATTATGATTTTAATAgctttgatgatgatgagggACAACATTCATTTGATCCATTCTATAGTATTGAGGAAGACATAAAAGACTCGTCCCGAACATCTGTTGCTACAGTTTTAAATTTCCATAACTTCTCAATTGAAGAAGCAAGAGAAGAGTCTATCCGTAGCTGCCGTGCTGATTTCGAAGTCAGAGAACCTTCCGAAAGGCCGATCACTATTGAGGAAATAAATGAAACTGAAGAAACTGATGACAGATATGACTCACGTTAA 1401 0.3947 MPILVTQHKCGGVTMIGNRYQQSDSPPYGGGTHNMRPRRLYQVWRGGNKFLCGGRLVFGPDVASLFLTTFLIAAPAFTFCIKMYLKFRNEKATVGHSFWWPVMIGGLVLTFLDFLFLLLTSGRDPGIIPRNSTPPEYEDAFNIPTPSMEWINGSTPHLKLPRTKDVMVNGHTVKVKFCDTCLLYRPPRTSHCSICDNCIQRFDHHCPWVGQCIGRRNYRHFFMFISTSTILCLYVFVFSWINLSESGVLEALSHDYVSDLLIIYCFIAVWFVGGLTAFHFYLICTNQTTYENFRYQYDKKGNPYNKGSLKNIRETLCSSIPPSRNNFRSFVQLDEHMTVGSLTPNNVHGILTPKEKIDVEMGSMHTDGRGYPIPELLRNYDFNSFDDDEGQHSFDPFYSIEEDIKDSSRTSVATVLNFHNFSIEEAREESIRSCRADFEVREPSERPITIEEINETEETDDRYDSR 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03160 466 MobiDBLite consensus disorder prediction 442 466 - -
Tsu07g03160 466 Pfam DHHC palmitoyltransferase 175 295 IPR001594 GO:0016409
Tsu07g03160 466 ProSiteProfiles DHHC domain profile. 176 226 - -
Tsu07g03160 466 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 39 344 - -
Tsu07g03160 466 PANTHER PROTEIN S-ACYLTRANSFERASE 3-RELATED 39 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03160 Tsu-Chr7 37548563 37552399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03160 102 318 Lipid Metabolism Gene Families AT4G22750 27.615 2.24e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03160 - - gmx:100779696 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03160 07 37548563 37552399 Tsu07g03160 07 37548563 37552399 ECH
Tsu07g03160 07 37548563 37552399 Tsu06g02572 06 33169605 33184938 PCT