Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g02572 ATGGGCTTTAGAAAAGGCAACACCAGCTCTACCCCGCATTTCTCCCGAATTTCAAGATATAATCCAACACCAAGCTGGTCTGGTGAACTTCTATCTAATCTCAAATGTAGAACTTTAGGAGATTTTAGATGGTACAAAGATACGTTCCTTACTAGAGTTTACACTAGAGATGATAGTCATCAACCTTTCTGGAAAGAAAAGTTTTTAGCCGGTCTCCCTAAGTCTTTAGGAGATAAGGTCAGAGAGAAGCTTAGGGGTCAAAACCCTAATGGTGACATTCCTTATGAGCAATTGAGCTATGGGCAACTAATTGCTTACATACAAAAGGTAGCCCTCAAGATTTGTCAAGAcgacaaaatccaaaaacaacTCGCCAAAGAAAAATCTGTTAATCGTAGAGATATGGGAACTTTCTGCGAACAATTTGGTTTACCTTGCTCTAAAGAGCCAAAATCCAAACCCAGGCATAGCCCACCTAAGCCAAAGTTCTATAGAAAACCCAGGCATAACCCTCATAGAAAGCCCAGCAATGAGGCCAAACCAGATAATCAATTTCCTTTCAAAAACAACTTTCCTAGAAAAGCTAGGTCGCCTGTTGTCTGTTACAATTGTGGCAAAGCAGGTCACATAAaTATGTACGTTGTTCCTCCACCTCAGAGATCCGATCCGGGTTCAGGATCTGCTGATTTACGTGTTTATCAAGCTTGGAAGGGTTCTAATaaattttttcttcaagGACGGTTCATATTTGGACCAGATGCAAGATCGTTGGGCCTGACAATTTTCCTTATTGTTGCTCCGGTTGTAGTGTTCTGCGTCTACGTTGCCAGAAAATTTTTCGATGATTATTCTGATCACTGGGGAGTATCCATAATGGCAGTTGCTATTGCCTTCACAATTTATGTCTTagttcttctcttctcaacATCTGGCCGTGACCCTGGCATAATCCCACGTAATGCACATCCTCCGGAGCCAGAAAGTCTTGAAGGAAGTGTAGATGTTGGGGCTGGTCAAACTCCTCAATTGCGGTTGCCTCGCATCAAGGAGGTTGAGGTCAATGGAATTGCTGTTAAAGTCAAGTATTGTGATACTTGCATGCTCTACAGGCCTCCTCGATGCTCTCACTGCTCAATTTGCAACAACTGTGTAGAGAGGTTTGATCACCATTGCCCCTGGGTTGGGCAGTGCATTGGGCTGCGTAACTATCGCTTCTTCTTCATGTTTGTCTTCTCAGCTACGATGCTTTGTATTTATGTTTTCGCATTTTGTTGGGTCTATATTAGAAGAATTATGAAGGCTGAGGAGACAACAATTTGGAAGGCAATGATCAAAAGTCCAGCTTCCATAGTCTTAATCATTTACACCTTCATCTGCATGTGGTTCGTTGGCGGCCTTACTGCCTTTCATTTATATCTCATAAGTACAAATCAGACTACATATGAGAACTTCAGATACCGATATGATCGACGGGCCAACCCTTATAACAGAGGAGTGTTCGATAATTTCAAAGAGATATTCTTCAGTAGCATTCCCTCATCAAAGAATAATTTCAGGGCAAAGGTGCCAATTGAACCAGTATTACCTGCTCGTTCGGTGGGTGGAGGCTTTATGAGTCCAAGTATGGGAAAAGCTGTTGACGACATAGAGATGGGAAGGAAAACAGTCTGGGGTGAAATGGGCAGTAGCATCGATCAATGTGAAGGTCAGTTAAACAATCGTACAGCTGTAAAGGACGGGGAGTTTGATGATTTGTCACCAGAAATTAGGACAACGGTAGATGAGACGAGCGAGCGTGTTGGAGTTCATCCTAGGAGATCTAGCTGGGGAAGAAAAAGTGGAAGCTGGGAGATGTCTCCTGAAGTTCTTGCTCTGGCAGCTAGGGTTGGAGAACCGAATCGTATCGGTGGAAGTAGCAGCAGTTTGAGCAATGAGAACAGACATTCATAG 1950 0.421 MGFRKGNTSSTPHFSRISRYNPTPSWSGELLSNLKCRTLGDFRWYKDTFLTRVYTRDDSHQPFWKEKFLAGLPKSLGDKVREKLRGQNPNGDIPYEQLSYGQLIAYIQKVALKICQDDKIQKQLAKEKSVNRRDMGTFCEQFGLPCSKEPKSKPRHSPPKPKFYRKPRHNPHRKPSNEAKPDNQFPFKNNFPRKARSPVVCYNCGKAGHINMYVVPPPQRSDPGSGSADLRVYQAWKGSNKFFLQGRFIFGPDARSLGLTIFLIVAPVVVFCVYVARKFFDDYSDHWGVSIMAVAIAFTIYVLVLLFSTSGRDPGIIPRNAHPPEPESLEGSVDVGAGQTPQLRLPRIKEVEVNGIAVKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRFFFMFVFSATMLCIYVFAFCWVYIRRIMKAEETTIWKAMIKSPASIVLIIYTFICMWFVGGLTAFHLYLISTNQTTYENFRYRYDRRANPYNRGVFDNFKEIFFSSIPSSKNNFRAKVPIEPVLPARSVGGGFMSPSMGKAVDDIEMGRKTVWGEMGSSIDQCEGQLNNRTAVKDGEFDDLSPEIRTTVDETSERVGVHPRRSSWGRKSGSWEMSPEVLALAARVGEPNRIGGSSSSLSNENRHS 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g02572 649 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 223 646 - -
Tsu06g02572 649 Pfam DHHC palmitoyltransferase 361 485 IPR001594 GO:0016409
Tsu06g02572 649 MobiDBLite consensus disorder prediction 148 189 - -
Tsu06g02572 649 PANTHER S-ACYLTRANSFERASE 223 646 - -
Tsu06g02572 649 MobiDBLite consensus disorder prediction 634 649 - -
Tsu06g02572 649 ProSiteProfiles DHHC domain profile. 361 411 - -
Tsu06g02572 649 MobiDBLite consensus disorder prediction 629 649 - -
Tsu06g02572 649 MobiDBLite consensus disorder prediction 157 173 - -
Tsu06g02572 649 MobiDBLite consensus disorder prediction 597 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g02572 Tsu-Chr6 33169605 33184938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g02572 291 523 Lipid Metabolism Gene Families AT4G22750 26.693 9.00e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g02572 - - gmx:100799812 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03160 07 37548563 37552399 Tsu06g02572 06 33169605 33184938 PCT