Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02981 atggaaaaaaatttgatcTTGAGAATGGTGTTAATGGTGGGTCTAATgggttgtttttgttgttatgtGGAAGGGCTTGGTGTTAACTGGGGAACACAAGCAACTCATAAATTACCACCAGAAACTGTTGTTAAGATGTTGAAGGATAATGGGATTCAGAAAGTTAAGCTTTTTGATGCTGATGATACAACAATGAGTGCTTTGGCTGGTAGTGGAATTGAAGTTATGGTTGCAATCCCTAATAATCAACTTGCTGTTATGAATGATTATAAGCGTGCTCAATATTGGGTTAGGAAGAATGTTACTCGTTATAACTTTGATGGAGGTGTTAAGATTAaATATGTGGCAGTTGGGAATGAGCCATTTTTGACATCCTACAACAATTCATTCTTGAACATCACCCTGCCTGCACTGCAGAACATTCAAAATGCCATTAATGAAGCTGGTTTTGGCGACACTATAAAAGCAACGGTGCCCTTAAATGCGGATGTGTATACGTCTCCAAAAGATAATTATGTTCCATCTGCAGGAATATTTAGGCCGGATATCAATGGTCTCATGACTGAGATGGTAGCATTTCTCAACAAGAACGGCGCACCATTTACCGTCAACATTTACCCCTTCTTAAGTCTTTACGGAAACGACGACTTTCCTTTCAATTTTGCCTTCTTCGATGGAGTAGACAACCCAATAAACGATAACGGAATCATATACACCAATGTCTTTGACGCAAATTTTGATACATTGGTTGCCGCTCTCAAATCAGTTGGTTTCGGCGACACACCAATTTTGGTAGGAGAAGTAGGATGGCCTACAGAAGGTGACAAGAATGCCAATACCGGCAATGCATTAAGATTCTACAACGGTCTTCTTTCAAGGCTCGCAGCAAACAAAGGAACACCTCGTCGCCCTGGATTCATTGAAGTTTATCTATTCGGACTCATAGACGAGGACGCAAAGAGCATCGCACCAGGGAACTTTGAGAGACACTGGGGAATATTTCGATACGACGGACAGCCAAAGTTTCCAATGGATTTTTCGGGTCAAGGttcaaacaaacttctaataggTGCACAAAATGTGAAGTATCTCGATTCAATGTGGTGCATGTTTAACCCTGATGCTAAAGATCTCAGCAAACTTGCCGATAACATTAATTTTGCTTGCACCTTTGGAGATTGCACTGCACTTGGGTATGGATCTTCTTGCAACAACCTTGATGCTAATGGAAATGCTTCTTATGCATTCAACATGTACTTTCAGACGCAGAATCAGAATCGTCAAGCATGCAATTTCGAAGGTTTAGCTAAGGTTACTACCGACAACATTTCAACACCTACTTGCAATTTCCTCATTCAGATAGTTCCTTCTGCAGCATCTTCTTTGATCCCCTCATTTGCTATGTTCTTGTTTATTGGTTTTTCAATGATTCTCTTTGCTTAG 1443 0.3915 MEKNLILRMVLMVGLMGCFCCYVEGLGVNWGTQATHKLPPETVVKMLKDNGIQKVKLFDADDTTMSALAGSGIEVMVAIPNNQLAVMNDYKRAQYWVRKNVTRYNFDGGVKIKYVAVGNEPFLTSYNNSFLNITLPALQNIQNAINEAGFGDTIKATVPLNADVYTSPKDNYVPSAGIFRPDINGLMTEMVAFLNKNGAPFTVNIYPFLSLYGNDDFPFNFAFFDGVDNPINDNGIIYTNVFDANFDTLVAALKSVGFGDTPILVGEVGWPTEGDKNANTGNALRFYNGLLSRLAANKGTPRRPGFIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFPMDFSGQGSNKLLIGAQNVKYLDSMWCMFNPDAKDLSKLADNINFACTFGDCTALGYGSSCNNLDANGNASYAFNMYFQTQNQNRQACNFEGLAKVTTDNISTPTCNFLIQIVPSAASSLIPSFAMFLFIGFSMILFA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02981 480 SUPERFAMILY (Trans)glycosidases 26 346 IPR017853 -
Tsu07g02981 480 Pfam Glycosyl hydrolases family 17 26 346 IPR000490 GO:0004553|GO:0005975
Tsu07g02981 480 Gene3D - 362 461 - -
Tsu07g02981 480 Pfam X8 domain 368 436 IPR012946 -
Tsu07g02981 480 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 2 467 - -
Tsu07g02981 480 SMART X8_cls 367 450 IPR012946 -
Tsu07g02981 480 Gene3D Glycosidases 25 353 - -
Tsu07g02981 480 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 2 467 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02981 Tsu-Chr7 35470311 35473316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02981 5 455 Miscellaneous Gene Families AT1G64760 74.279 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02981 - - gmx:100815300 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02981 07 35470311 35473316 Tsu07g02981 07 35470311 35473316 ECH
Tsu07g02981 07 35470311 35473316 Tsu03g02808 03 37891064 37895469 PCT