Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02723 ATGCCTGGTTTTGTTGTTGGAAAGAAGAGATTTATAAAGTCAGATATGTGTTTTGCCGATTCAGTCAATCAAGATAAATCAACTTGTACACGAAGCAATCATAGTTTAACTAGTGAGGCTATGGATAAAGATGATAGCCCTACGGCTATTCTACCTGGGCTGCCCGATGATGTTGCANAACTTTATTGTCTTGCACTTGTTCCTCGTTCTAACTTCCCAGCTATGGGTGGTGTCTGTAAGAATTGGAGGTTGTTTATTCAAAGCAAAGAATTTGTAATGGTGCGAAAATTGGCAGGATTGCTTGAGGAATGGCTCTATTGCTTAACAATGGACAGTGAAGGGAGGGAAAGCCGTTGGGAGGTAATGGATTGTCTCGGTCGCAAATGTCTATCCCTTCCACCAATGCCTGGTCCATGTAAGGCTTCATTCGGGGTTGTGGTTCTTAATGGAAAGCTTGTTATCATAGCCGGTTATTCAGCTATTGAAGGAACCGCTGTTGCCTCAGCAGAGGTTTACCAATATGATTCTTACCTTAACAGTTGGAGTAGATTATCAAACATGAATGTGGCTCGTTATGACTTTGCTTGTGCCGAAGTGAACGGCTTGATTTATATTGTTGGAGGTTATGGGGTGAACAGTGACTGTCTCTCTAGTGTTGAGATGTATGATCCAGAGACTGACAAGTGGACACTGATAGAAAGCCTTCGTCGCCCAAGGTGGGGTTGCTTTGCTTGTGGATTTGAAGATAAGCTCTATGTCATGGGCGGAAGGTCAAGCTTTACTATTGGAAACTCCAGGTTTGTCGATATATATAACCCCGAGAAACACAGCTGGTGCGAGATTAAGAATGGCTGTGTTATGGTCACGGCTCATGCAGTATTGGAAAAGAAATTGTTCTGTATTGAGTGGAAAAACCAGCGGAAGCTGGCAATATTCAGTCCAGAGAACAACTCATGGACAATGGTACCTGTCCCATTGACAGGGAGCTCGAGTGTTGGTTTTCGATTTGGGATACTGGACGGGAAGTTATTGCTATTTCCCTTGGATAAAGAACCTACTAATCAAACATTATTATATGATCCAAATGCAGCTTTGGGGTCAGAGTGGCAAACTTCAGACATAAAGCCATCCGGTTTGTGCTTGTGCAGTGTGACAATGAAGGCATGA 1167 0.431 MPGFVVGKKRFIKSDMCFADSVNQDKSTCTRSNHSLTSEAMDKDDSPTAILPGLPDDVAXLYCLALVPRSNFPAMGGVCKNWRLFIQSKEFVMVRKLAGLLEEWLYCLTMDSEGRESRWEVMDCLGRKCLSLPPMPGPCKASFGVVVLNGKLVIIAGYSAIEGTAVASAEVYQYDSYLNSWSRLSNMNVARYDFACAEVNGLIYIVGGYGVNSDCLSSVEMYDPETDKWTLIESLRRPRWGCFACGFEDKLYVMGGRSSFTIGNSRFVDIYNPEKHSWCEIKNGCVMVTAHAVLEKKLFCIEWKNQRKLAIFSPENNSWTMVPVPLTGSSSVGFRFGILDGKLLLFPLDKEPTNQTLLYDPNAALGSEWQTSDIKPSGLCLCSVTMKA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02723 388 Gene3D - 90 386 IPR015915 GO:0005515
Tsu07g02723 388 SUPERFAMILY Kelch motif 102 363 IPR015915 GO:0005515
Tsu07g02723 388 PANTHER OS02G0202900 PROTEIN 1 388 IPR045887 -
Tsu07g02723 388 SMART kelc_smart 151 201 IPR006652 GO:0005515
Tsu07g02723 388 SMART kelc_smart 250 298 IPR006652 GO:0005515
Tsu07g02723 388 SMART kelc_smart 202 249 IPR006652 GO:0005515
Tsu07g02723 388 Pfam Kelch motif 239 282 IPR011498 GO:0005515
Tsu07g02723 388 Pfam Kelch motif 190 235 IPR006652 GO:0005515
Tsu07g02723 388 Pfam Kelch motif 141 188 IPR006652 GO:0005515
Tsu07g02723 388 PANTHER KELCH REPEAT F-BOX PROTEIN 1 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02723 Tsu-Chr7 31857634 31859096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02723 54 233 Miscellaneous Gene Families AT4G33900 27.320 1.11e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02723 - - gmx:100802912 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02723 07 31857634 31859096 Tsu07g02723 07 31857634 31859096 ECH
Tsu07g02723 07 31857634 31859096 Tsu02g01206 02 10162431 10163628 PCT