Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02705 ATGGCCACTAAAGAGAAGGATGTGAAGGTTGAGAATCAGAACAAAGAACTAAAGCGTTTAGGGTTTGTGAAGATTGCTGCTATTCGTacttttgtgtttgtttcataTTTGTATGAATCTGCTAAGAAGAACTCAGGGTCTTTAAGATCCGCTGTTGAAACTGTGGAGGGATCTGTAACAACCGTTATTGGTCCTGTCTACAACAAATTCAAGGGTGTCCCTGATGATGTCCTTGTTTTTGTTGACAATAAGGTTGATGAAGCCACTCACAAGTTCAATGAGCATGCTCCTCATATTGCTAGGCAGCTCGCGGATCAAACCAAAAGTCTGATTCAGAAAGTGTCATATGAGGCCGGGAAAGTTGCGAGTGTTGGTCGATCTGCAGGACCAAGAGCAGCTGTAGATTATGTTATTACAGAGTCCAAGAATTTGCTGCTAATCAATTCAGTGAAGCTCTGGACTGTACTAAACCAATTTCCACCATTCCATGCTGTGGCAGAGATGGCAATTCCCACTGCTGCTCACTGGTCTGAGAAATACAACCATGCAATCAAGGCCATGACTGAAAAGGGTTATAGTTTTGTTGGTTATTTACCTTTGGTTCCTATTAATGAATTATCTAAGGCATTTAAGCGGGGAGAAGTTAAGGAAAAGAAAACAGCATAA 666 0.4054 MATKEKDVKVENQNKELKRLGFVKIAAIRTFVFVSYLYESAKKNSGSLRSAVETVEGSVTTVIGPVYNKFKGVPDDVLVFVDNKVDEATHKFNEHAPHIARQLADQTKSLIQKVSYEAGKVASVGRSAGPRAAVDYVITESKNLLLINSVKLWTVLNQFPPFHAVAEMAIPTAAHWSEKYNHAIKAMTEKGYSFVGYLPLVPINELSKAFKRGEVKEKKTA 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02705 221 PANTHER RUBBER ELONGATION FACTOR-RELATED 2 220 - -
Tsu07g02705 221 Pfam Rubber elongation factor protein (REF) 12 211 IPR008802 -
Tsu07g02705 221 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 2 220 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02705 Tsu-Chr7 31715310 31717709 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02705 - - mtr:MTR_3g085370 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02705 07 31715310 31717709 Tsu07g02705 07 31715310 31717709 ECH
Tsu07g02705 07 31715310 31717709 Tsu02g01199 02 10073042 10075084 PCT