Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01199 atGACCACCACCAAAcagAGTGATGGTAATAATGATCATGATCAAGAACTTAAACATCTTGGGTTTGTGAAAATTGCTGCTATTCAAGCTTTTGTTTGCATGTCAAGTCTTTATGATTATGCAAAACAAAATTCAGGTCCTTTGAGATCTGCTGTTGGTACCGTTGAAGGTACTGTCACTACCGTTCTTGGTCCTGTTTATCACAAATTCAAGCCTCTCCCTCAagatcttcttgtttttttcgACAACAAGGTTGATGAAGCAAGTAACAAATTCGACGAGCATGCTCCGGCTTTTGCGAAACAAGTAGCCAACCAAGCTAAAGGTTTGATTCAAGAAGTAACACACAAAGCTGAGAGAGCTGTGAATGAAGCTCAATCTGGTGGAGCAAAAGCAGCTGCAAATTATGTAGCTACAGAATCAAAGCAAATAGTTCTAACAGGATCAGTTAAACTATGGTCAGGTCTTAACCACTATCCACTATTTCATGCAGTGGCAGAGTTGGCAGTTCCAACAGTTGCACATTGGTCAGAAAGATATAACCATGTTGTTAAGGGCATTAGTGGAAAGCCTTATGCTGTGTTTGGATATTTGCCTTTGATTCCTATTGATGAAATAGCTAAGGCATTTAAACAAGGAGAAGGTAAGGTTAGTGATCATGAAAAAGCATCTGTGAAAGTTGTTTCTGATGAGGTCGGATCCTCTCCTTCCATCTCTCTCCATCCTTCAAAAATATATGTGCAATAG 747 0.3842 MTTTKQSDGNNDHDQELKHLGFVKIAAIQAFVCMSSLYDYAKQNSGPLRSAVGTVEGTVTTVLGPVYHKFKPLPQDLLVFFDNKVDEASNKFDEHAPAFAKQVANQAKGLIQEVTHKAERAVNEAQSGGAKAAANYVATESKQIVLTGSVKLWSGLNHYPLFHAVAELAVPTVAHWSERYNHVVKGISGKPYAVFGYLPLIPIDEIAKAFKQGEGKVSDHEKASVKVVSDEVGSSPSISLHPSKIYVQ 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01199 248 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 11 227 IPR008802 -
Tsu02g01199 248 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
Tsu02g01199 248 PANTHER RUBBER ELONGATION FACTOR-RELATED 11 227 - -
Tsu02g01199 248 Coils Coil 104 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01199 Tsu-Chr2 10073042 10075084 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01199 - - gmx:100499806 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01199 02 10073042 10075084 Tsu02g01199 02 10073042 10075084 ECH
Tsu07g02705 07 31715310 31717709 Tsu02g01199 02 10073042 10075084 PCT