Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02703 ATGCGAACCAGAAGAGGATTTTGTTATCCTCTAACACTACCACTTTCAAAAATGTGTTCAGAGTCAACAAATACCCACAAAAGACAGAAGAGAATGCTGCCGGAAAAACCCACCGGAGATCCTGATTTCTTTGAATCTTTACCTGATGATCTTGTTCTCTCTGTTCTCACTAAGCTTAGTTCCACAGCAACTTCACCCTCTGATTTTATCAGTGTTCTAATCACGTGTAAAAGACTAAATGGTTTAAGTCTAAACTCTTCTGTTTTGTCGAAAGCATCAAACAAAACATTATCAGTTAAAGCTAAAAATTGGTGTGACTCTGCTCATCGCTTCCTCAAACGCTGTGTTGATGCTGGAAACATTGAAGCTTGTTACACTCTTGGAATGattcgTTTTTATTGCCTGGAAAACAGAGGAAGTGGCGCGTCATTGATGGCAAAAGCAGCTATGAAATCTCACGCGCCGTCGTTGTATTCATTAGCTGTGATTCAGTTTAATGGAAGCGGCGGAACAAAAAACGACAAAGATTTGCGAGCCGGTGTTGCTCTGTGCGCTCGGGCTGCATTTCTTGGACACATAGACGGTCTGCGAGAGTTGGGTCATTGTTTACAAGATGGATATGGCGTTAAACAGAACGTTACAGAGGGACGGCGGTTTTTAGTTCAAGCTAACGCCCGTGAACTCGCTGCCGTTTTATCTAACGGCAACAACAAACAACCGTTGCTGACGTGGAATATTAACCCGGTTCCGAGTCAGCCACCACAGCTTCGGATCATTTCCGGGTCGTCGGGTTGTCCGTTGCTTAGTGATTTTGGTGTAATATTCCGGTTCAAGAGGCTCACCCGGCGAACCGGTTTATGA 861 0.4402 MRTRRGFCYPLTLPLSKMCSESTNTHKRQKRMLPEKPTGDPDFFESLPDDLVLSVLTKLSSTATSPSDFISVLITCKRLNGLSLNSSVLSKASNKTLSVKAKNWCDSAHRFLKRCVDAGNIEACYTLGMIRFYCLENRGSGASLMAKAAMKSHAPSLYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDGLRELGHCLQDGYGVKQNVTEGRRFLVQANARELAAVLSNGNNKQPLLTWNINPVPSQPPQLRIISGSSGCPLLSDFGVIFRFKRLTRRTGL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02703 286 PANTHER MYND DOMAIN-CONTAINING 22 273 IPR044508 -
Tsu07g02703 286 SUPERFAMILY HCP-like 105 223 - -
Tsu07g02703 286 SUPERFAMILY F-box domain 35 89 IPR036047 GO:0005515
Tsu07g02703 286 Gene3D Tetratricopeptide repeat domain 84 239 IPR011990 GO:0005515
Tsu07g02703 286 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 22 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02703 Tsu-Chr7 31678962 31680607 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02703 - - gmx:100798136 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02703 07 31678962 31680607 Tsu07g02703 07 31678962 31680607 ECH
Tsu07g02703 07 31678962 31680607 Tsu02g01198 02 10062403 10064221 PCT