Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01198 ATGTTGAAGCGTGTTATACTTTGGGCATGGTTAGtattaaaatcaaatcatgATAAAatcgaaaaaataaatgaaaagatTGAGATCTGTGAATTTATTTCTCTAACAGAAACggttattgttttttttgttgtgcaGATTCGATTTTATTGTTTACAAAACAGAGGGAGCGGTGCTTCGCTTATGGCGAAAGCAGCGATGAATTCACACGCGCGTGCTCTTTACTCGCTTGCAGTTATACAGTTCAACGGCAGCGGTGGTACCAAAAGTGACAAAGACCTCCGTGCCGGAGTTGCTCTATGCGCTAGAGCCGCTTTTCTCGGCCACATAGATGCCTTACGTGAGCTTGGCCACTGTTTACAAGACGGTTACGGTGTTAAACAGAATATCTCTGAGGGAAGACGTTTTCTTATTCAGGCAAACGCACGTGAACTCGCCGCCGTGTTATCCACCAACGCCGCCGCGCGTCAGTTAGTTAACACAAATCTTCAGTCACAGCTTCGATATGTTGCGGCTACTGGATGTCCGTTGTTAAGTGATTTTGGATGTAATGTTCCGGCACCGGAGCCACATCCGGCAAACCGGTTTTTGACGGAATGGTTTACGGTTCGGAGTGGTTCACTTGATTCGGGTTTGAGACTCTGTTCACATGCGGGATGTGGTAGACCGGAGACACGGAAACACGAGTTTCGACGGTGTTCCGTTTGTGGTGCGGTGAATTATTGCTCACGCGCTTGTCAAGCACTTGATTGGAAGTTTCGTCATAAGGCGGAGTGTGCTCCGGTGGAACGGTGGCTTGATGAGGATGGTGAAGACGACGGCGAAGATGACGGCAACCGTGAGGTAATGGTTATGGAGGATAGTTAG 867 0.4533 MLKRVILWAWLVLKSNHDKIEKINEKIEICEFISLTETVIVFFVVQIRFYCLQNRGSGASLMAKAAMNSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNISEGRRFLIQANARELAAVLSTNAAARQLVNTNLQSQLRYVAATGCPLLSDFGCNVPAPEPHPANRFLTEWFTVRSGSLDSGLRLCSHAGCGRPETRKHEFRRCSVCGAVNYCSRACQALDWKFRHKAECAPVERWLDEDGEDDGEDDGNREVMVMEDS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01198 288 PANTHER MYND DOMAIN-CONTAINING 44 285 IPR044508 -
Tsu02g01198 288 MobiDBLite consensus disorder prediction 267 288 - -
Tsu02g01198 288 ProSiteProfiles Zinc finger MYND-type profile. 217 259 IPR002893 -
Tsu02g01198 288 Gene3D Tetratricopeptide repeat domain 49 170 IPR011990 GO:0005515
Tsu02g01198 288 Gene3D - 209 263 - -
Tsu02g01198 288 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 44 285 - -
Tsu02g01198 288 Pfam MYND finger 219 259 IPR002893 -
Tsu02g01198 288 SUPERFAMILY HIT/MYND zinc finger-like 214 264 - -
Tsu02g01198 288 SUPERFAMILY HCP-like 49 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01198 Tsu-Chr2 10062403 10064221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01198 - - gmx:100798174 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01198 02 10062403 10064221 Tsu02g01198 02 10062403 10064221 ECH
Tsu07g02703 07 31678962 31680607 Tsu02g01198 02 10062403 10064221 PCT