Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02349 ATGGCAGTTTCCATGAGAGATTTGGATCCAGTTTTCCAGGGAGCTGGACAAAAGGCCGGACTTGAAATATGGcgtattgaaaattttaatccAGTACCTGTTCCAAAGTCCTCATATGGAAAATTTTTCACTGGGGATTCCTATGTGATCTTAAAGACAACCGCATCAAAAAGTGGTGCTCTGCGTCATGACATCCATTACTGGATTGGTAAAGACACCAGTCAGGATGAAGCTGGTGTTGCAGCCATCAAGACAGTTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGGGAAGTACAGGGCCATGAAACTGAAAAGTTCCTGTCTTATTTCAAACCTTGTATTATACCTCAAGAAGGCGGTGTTGCTTCTGGTTTTAAACACGCCGAGGCTGAAAAGCACAAGACACGGTTGTTTGTATGCAGAGGGAAACATGTTGTACATGTCAAAGAGgTTCCTTTTGCTCGATCTTCACTCAACcatgatgatatttttgttcttGACACTGAGTCAAAAATCTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGGGCTAAAGCTTTGGAAGTTGTACAGTATATTAAGGATACCTACCATGAGGGGAAATGCGAGATAGCTGCTATCGAGGATGGAAAGTTGATGGCTGATCCTGAAACTGGGGAATTCTGGGGTTTCTTTGGCGGATTCGCTCCACTTCCACGAAAAACAGCCAGTGATAATGACAAGTCTGCCGATTCTCGTTCTCCAAAACTGCTTCGTGTTGAAAAAGGACAGGCGGAACCTGTTGAGGCCGACTCTTTAAAAAGGGAGTTTCTAGACACAAATAAATGTTACATTCTGGATTGTGGGTTGGAAATGTTTGTCTGGATGGGAAGAAACACCTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGTTGCTGATGAGTTAGTCAGTGGCATTGATCAACCTAAACCCCAAATAATTCGAGTAATTGAAGGATTTGAAACTGTGCTGTTTAAGTCCAAGTTTGAGTCTTGGCCTCAGACCCCTGATGTAACTGTATCTGAAGATGGACGCGGCAAGGTAGCAGCACTTCTGAAACGTCAAGGAGTAAATGTCAAGGGTCTGTTGAAAGCTGATGCAGTAAAAGAAGAACCTCAACCTTACATTGATTGCACTGGACATTTGCAGGTTTGGCGTGTGAACGGTCAGGAAAAGATTCTTCTCCCAGCTTCTGatcaatcaaaattttatagTGGGGATTGCTTCATCTTTCAATATTCATATCCTGGAGAAGATAAGGACGATTGTCTTATTGGAACATGGATAGGAAAGAACAGTGTTGAGgAAGAAAGGGCTTCAGCTAATTCACTGGCTAGCAAAATGATTGAGTCAATGAAGTTTCTGGCTTCCCAGGCTCGTATATATGAAGGCAATGAACCGATTCAATTTCATTCTATCCTACAAACCTTCATTGTTTTTAAGGGCGGGCTTAGTGATGGGTACAAGACTTACATTGCGGAAAAGGATATTCCAGATGATACATACACTGAGGACAGTTTAGGATTATTCCGAATCCAAGGCTCTGGACCAGACAATATGCAAGCTATACAAGTTGAACCGGTTGCTTCTTCCTTGAATTCCTCTTATTGCTATATACTTCATAATGGGCCTGCGGTCTTTACTTGGTCTGGAAGCAATACAAGTGCAGAAGACCAGGAACTTGTAGAGAGGATGCTGGATTTGATAAAGCCAAATTTACAATCAAAACCACAAAGGGAAGGTACAGAATCTGAACAATTTTGGGATTTGTTGGGAGGAAAATCAGAATATCCCAGTCAAAAGATTAGTAGGGAGCCTGAAAGTGATCCACACCTATTTTGTTGCAACTTCTCAAAAGGAAACTTAAAGGTGACGGAGATATACAACTTCTCCCAGGATGATTTAATGACAGAAGACATTTTCATCTTGGATTGTTACTCAGAAATCTTTGTCTGGGTTGGCCAGGAGGTTGACCCCAAGAGTAGAATGCAGGCGCTAACAATTGGTGAGAAATTTATTGAGCATGATTTTCTGCTGGAAAAGTTATCTCGCGTGGCTCCAGTATATGTTATCATGGAAGGGAGTGAGCCACCGTTTTTCACTCGCTTTTTTAATTGGGAGTCGGCAAAGTCTGCAATGTTGGGGAACTCATTTCAAAGAAAGCTTAAAATCGTGAAAAATGGGGGTGCTGCACCATTGGATAAACCAAAACGGCGAACACCTACATACGGAGGAAGGTCTAGTAGTGTGCCTGATAAGTCCCAGCAGCGTTCCTCTCGTAGCATGTCTGTTAGTCCTGACCGTGTTCGTGTGAGGGGCAGGTCTCCAGCTTTTAATGCACTAGCTGCTACTTTTGAGAGCTCCAATGCTAGGAATCTTTCAACTCCACCTCCAGTAATTAGAAAGCTGTATCCAAAATCTACGACACCAGATTCTGCAATACTAGCATCAAAATCTAAAGCCATAGCTGCACTTACTTCTAGTTTTGAACAACCACCTTCTGCACGAGAAAGTTTGATACCTCGGTCAGTTAAAGTGAGTCCAATCACCCCTAAATCAAACCCTGAGAAAAATGACAAGGAGAATTCTGTGAGCGGCAGAGTGGACTCTCTTACCATAGAGGAAGATGTGAAAGAAAGTGAAGCTGAAGATGAGGAAGGTCTCCTTATCTACCCATATGAACGCCTTAAAATAACTTCTACAGATCCTGTGCCGGACATTGATGTAACTAAAAGAGAgACTTATCTATCATCTGCGGAGTTCAAAGAGAAATTTGCGATGTCCAAGGATGCTTTTTACAAGTTGCCCAAATGGAAacaaaacaaactcaaaatgGCTATTCAGTTATTCTGA 2889 0.414 MAVSMRDLDPVFQGAGQKAGLEIWRIENFNPVPVPKSSYGKFFTGDSYVILKTTASKSGALRHDIHYWIGKDTSQDEAGVAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHAEAEKHKTRLFVCRGKHVVHVKEVPFARSSLNHDDIFVLDTESKIFQFNGSNSSIQERAKALEVVQYIKDTYHEGKCEIAAIEDGKLMADPETGEFWGFFGGFAPLPRKTASDNDKSADSRSPKLLRVEKGQAEPVEADSLKREFLDTNKCYILDCGLEMFVWMGRNTSLDERKSASGVADELVSGIDQPKPQIIRVIEGFETVLFKSKFESWPQTPDVTVSEDGRGKVAALLKRQGVNVKGLLKADAVKEEPQPYIDCTGHLQVWRVNGQEKILLPASDQSKFYSGDCFIFQYSYPGEDKDDCLIGTWIGKNSVEEERASANSLASKMIESMKFLASQARIYEGNEPIQFHSILQTFIVFKGGLSDGYKTYIAEKDIPDDTYTEDSLGLFRIQGSGPDNMQAIQVEPVASSLNSSYCYILHNGPAVFTWSGSNTSAEDQELVERMLDLIKPNLQSKPQREGTESEQFWDLLGGKSEYPSQKISREPESDPHLFCCNFSKGNLKVTEIYNFSQDDLMTEDIFILDCYSEIFVWVGQEVDPKSRMQALTIGEKFIEHDFLLEKLSRVAPVYVIMEGSEPPFFTRFFNWESAKSAMLGNSFQRKLKIVKNGGAAPLDKPKRRTPTYGGRSSSVPDKSQQRSSRSMSVSPDRVRVRGRSPAFNALAATFESSNARNLSTPPPVIRKLYPKSTTPDSAILASKSKAIAALTSSFEQPPSARESLIPRSVKVSPITPKSNPEKNDKENSVSGRVDSLTIEEDVKESEAEDEEGLLIYPYERLKITSTDPVPDIDVTKRETYLSSAEFKEKFAMSKDAFYKLPKWKQNKLKMAIQLF 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02349 962 MobiDBLite consensus disorder prediction 241 262 - -
Tsu07g02349 962 SMART VHP_1 927 962 IPR003128 GO:0003779|GO:0007010
Tsu07g02349 962 MobiDBLite consensus disorder prediction 856 887 - -
Tsu07g02349 962 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Tsu07g02349 962 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Tsu07g02349 962 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Tsu07g02349 962 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Tsu07g02349 962 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Tsu07g02349 962 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Tsu07g02349 962 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Tsu07g02349 962 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Tsu07g02349 962 SUPERFAMILY VHP, Villin headpiece domain 888 962 IPR036886 GO:0003779|GO:0007010
Tsu07g02349 962 MobiDBLite consensus disorder prediction 754 777 - -
Tsu07g02349 962 MobiDBLite consensus disorder prediction 741 783 - -
Tsu07g02349 962 SUPERFAMILY Actin depolymerizing proteins 137 239 - -
Tsu07g02349 962 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Tsu07g02349 962 CDD gelsolin_S2_like 138 223 - -
Tsu07g02349 962 Pfam Villin headpiece domain 927 962 IPR003128 GO:0003779|GO:0007010
Tsu07g02349 962 Gene3D Villin headpiece domain 900 962 IPR036886 GO:0003779|GO:0007010
Tsu07g02349 962 Gene3D Severin 247 355 IPR029006 -
Tsu07g02349 962 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Tsu07g02349 962 SMART VILL_6 392 489 IPR007122 GO:0051015
Tsu07g02349 962 SMART VILL_6 254 344 IPR007122 GO:0051015
Tsu07g02349 962 SMART VILL_6 137 234 IPR007122 GO:0051015
Tsu07g02349 962 SMART VILL_6 622 719 IPR007122 GO:0051015
Tsu07g02349 962 SMART VILL_6 519 606 IPR007122 GO:0051015
Tsu07g02349 962 SMART VILL_6 19 117 IPR007122 GO:0051015
Tsu07g02349 962 PANTHER VILLIN 1 962 IPR007122 GO:0051015
Tsu07g02349 962 CDD gelsolin_S6_like 621 718 - -
Tsu07g02349 962 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 255 427 IPR036180 -
Tsu07g02349 962 Gene3D Severin 7 132 IPR029006 -
Tsu07g02349 962 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Tsu07g02349 962 Gene3D Severin 613 733 IPR029006 -
Tsu07g02349 962 CDD gelsolin_S3_like 254 343 - -
Tsu07g02349 962 MobiDBLite consensus disorder prediction 243 262 - -
Tsu07g02349 962 Pfam Gelsolin repeat 638 712 IPR007123 -
Tsu07g02349 962 Pfam Gelsolin repeat 150 216 IPR007123 -
Tsu07g02349 962 Pfam Gelsolin repeat 266 334 IPR007123 -
Tsu07g02349 962 Pfam Gelsolin repeat 28 111 IPR007123 -
Tsu07g02349 962 Pfam Gelsolin repeat 410 480 IPR007123 -
Tsu07g02349 962 ProSiteProfiles Headpiece (HP) domain profile. 897 962 IPR003128 GO:0003779|GO:0007010
Tsu07g02349 962 CDD gelsolin_S4_like 386 485 - -
Tsu07g02349 962 CDD gelsolin_S1_like 12 124 - -
Tsu07g02349 962 Gene3D Severin 518 612 IPR029006 -
Tsu07g02349 962 CDD gelsolin_S5_like 521 608 - -
Tsu07g02349 962 SUPERFAMILY Actin depolymerizing proteins 511 615 - -
Tsu07g02349 962 Gene3D Severin 388 501 IPR029006 -
Tsu07g02349 962 PANTHER VILLIN-3-LIKE 1 962 - -
Tsu07g02349 962 Gene3D Severin 133 246 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02349 Tsu-Chr7 26796614 26811137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02349 - - gmx:100808499 1743.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02349 07 26796614 26811137 Tsu04g04592 04 53481311 53488547 PCT