Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02342 ATGGGATGTTCACAATCGAAGTTAGACGATGAAGAGTCGGTTCAGCTTTGTAAAGATAGAAAAAGGTTCATCAAACAAGCTGTTGAGCAAAGAACTCGGTTCGCAACTGGTCATATAGCTTACATTGAATCTATGAAAAGAGTTTCAGCTGCTCTTCGTGATTATATAGAAGGTGACGAGCCTCGTGAGTTCTCATTAGACACGGTCATTACACCGCCTTTTACGCCTGTGAAGAAGAGAACTAACCATAGCATTGGCAATGGCAATGACAATGGTAAGGGTAATGATTTCATTCCTATATCAGCAAAATCTTTCACACCATCGTCTATTGAGTTTGGAGTTGGATCGAATTCTACTTTGAGAATGAATTACTTTAGGCCGAGTGGTAATCCGGTAATTTCGGTTGAGGAAAGAGCTCCAACACCTGAAACTGTTCGAATGGAAGCGTATTCACCAATGCAGCAGCATTATGGCATGGATGGTTATTTTACAATGCAATCACCGCCTATGAATCCTTCTATTTTTCCTTATTCTCCTCCTAATGTTAGGTCTAATATGCCTCCACCTTCGCCTCAAAATACTCAATGGGATTTCTTTTGGAACCCCTTTTCGTCGTTTGATTACTATGGTTATCCAAGCCGAAGTAGCTTCGATCAAACTGGTATCGATGATGAATATCGAGAACTAAGACAGGTTCGAGAAGAAGAGGGAATACCGGAccttgaagaagatgaaactgAACAAGAAGATTACGTTAGGAAGAGAAATGTAGCAGAAGAAAGAACTAGAAATGTAGTAGAAGCAAGAACTCGAAATGTAGCAGAAGGAAGAACTCGAAATGTAGTAGAAGAAAGAACTCGAAATGTAGGAGAAGGAAGAACTAGAAATGTAGTAGAAGAAAGAACTCGAAATGTAGTAGAAGAAAGAACTAGAAATGATGTAAATTTCTCCAAAGAAGAAGTTGTTGTTGAAGATATCGATGACAATGATGatgaggaagaggaagaagaggaggacgaggaagaggatgaagaagagGGGACAGACGATGAAACTGAAACCGAAAACGAGCATGATGTCAAAGATTTACAACAACCTCATGGCAGTGCAAGTTTTGAAGTATCAAAAAATCAAGCGGCAGGTCATATTGAGTCCAGCCATAGAGAAATGTCAATTGGTAAACAAGAGCCTAAGGAAGAGATGGCAGGTTTTACCGTTTATGTTAACCGAAGACCAACCAGCATGGCAGAAGTGATCAATGATCTCGAAGCTCAATTCAAAACTGTGTGCAGTGCAGCTAGCGATGTCTCGATTTTGTTAGAGTCGAAGAAAGCTCAATATTTATTAACATCTCATGAACATTCAGCATCGAAATTATTGAACCCTGTCGCTATGTTCCGGTCAGCTTCTTCGCGCTCATCTTCGTCAAGATTTTTAGCGAATTCTTCAAGCACTAGGATGGAAAGTTATGAGGGCACTAAGGATATCTCAGATGAACCTTGTAGGCTTTCTGGTAGTCATCAATCTACCTTGGACAAATTGAATGCATGGGAGAAGAAGCTCTATGAGGAAGTCAAGTCTGGAGAACGAATCCGAATCGCATATGAGAAAAAATGCAAGCAACTAAGCAACTATGAAGTAAAAGGAGAGGACCCTTCTGCGGATAAAACAAGAGCAGCCATTAGAGATCTAGATACTCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCCCGGAGAATCGAAACTCTCAGAGACAAAGAGTTGTATCCCCAACTTCTTGAATTAGTACAAGGGCTTGAAAAGATGTGGAAAGTGATGGCAGAATGTCATCAAACACAGAAGAGAACCTTAGATGAGGCTAAGATTCTTCTTGCAGGCACGCCTTCTAAATTACAGTCCAGAAGACAACAACAGTCTTCCATCTCAATGACCGATCCAAATAGGCTGGCACGATCAGCCTCAATTCTTGAAACCGAGTTACGAAACTGGCGAAACACCTTTGAGTCATGGATCACTTCTCAAAGATCCTATATTCAAGCATTAACCGGATGGCTTCTCCGGTGCGTGAGATCCGAATCCGATGACGTATCGAAGTCACCGTGCTCTCCTCATAGGTCGAGCAACACTCACCCGTTATTCGGACTCATTGTTCAGTGGTCGAGGCGTCTAGATGCCATACGGGAAAACGCAGTGCTTGACGGAATGGACTTTTTTGCAGCCGGGATGGGATCACTCTATGCACATCAATTGAGACAAGATTCGAGGCCGAATTCATACGCACCAAAGCAAAGTGGTGAGTGCATGGAATTAGTGGAAGTTGGTCATGTGGAAGAAGAGGTAATGGCTCCCGAAAAACTCGCTGAAGTTGCTATTAAAGTGCTTTGTGCTGGAATGTCTGTTGCTATAAGCTCATTAGCTGATTTTGCTTTTGATTCTGCTGAGGCATATAGTGAAGTTGTCAAGCAATGGGAGAGTGTGAAGGATCAAAAGCATAATTCTAGTGAGACTAGAACATAG 2523 0.4051 MGCSQSKLDDEESVQLCKDRKRFIKQAVEQRTRFATGHIAYIESMKRVSAALRDYIEGDEPREFSLDTVITPPFTPVKKRTNHSIGNGNDNGKGNDFIPISAKSFTPSSIEFGVGSNSTLRMNYFRPSGNPVISVEERAPTPETVRMEAYSPMQQHYGMDGYFTMQSPPMNPSIFPYSPPNVRSNMPPPSPQNTQWDFFWNPFSSFDYYGYPSRSSFDQTGIDDEYRELRQVREEEGIPDLEEDETEQEDYVRKRNVAEERTRNVVEARTRNVAEGRTRNVVEERTRNVGEGRTRNVVEERTRNVVEERTRNDVNFSKEEVVVEDIDDNDDEEEEEEEDEEEDEEEGTDDETETENEHDVKDLQQPHGSASFEVSKNQAAGHIESSHREMSIGKQEPKEEMAGFTVYVNRRPTSMAEVINDLEAQFKTVCSAASDVSILLESKKAQYLLTSHEHSASKLLNPVAMFRSASSRSSSSRFLANSSSTRMESYEGTKDISDEPCRLSGSHQSTLDKLNAWEKKLYEEVKSGERIRIAYEKKCKQLSNYEVKGEDPSADKTRAAIRDLDTQITVSIHSVEAISRRIETLRDKELYPQLLELVQGLEKMWKVMAECHQTQKRTLDEAKILLAGTPSKLQSRRQQQSSISMTDPNRLARSASILETELRNWRNTFESWITSQRSYIQALTGWLLRCVRSESDDVSKSPCSPHRSSNTHPLFGLIVQWSRRLDAIRENAVLDGMDFFAAGMGSLYAHQLRQDSRPNSYAPKQSGECMELVEVGHVEEEVMAPEKLAEVAIKVLCAGMSVAISSLADFAFDSAEAYSEVVKQWESVKDQKHNSSETRT 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02342 840 MobiDBLite consensus disorder prediction 323 356 - -
Tsu07g02342 840 MobiDBLite consensus disorder prediction 75 95 - -
Tsu07g02342 840 PANTHER UNCHARACTERIZED 1 840 - -
Tsu07g02342 840 Coils Coil 241 261 - -
Tsu07g02342 840 MobiDBLite consensus disorder prediction 75 91 - -
Tsu07g02342 840 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Tsu07g02342 840 MobiDBLite consensus disorder prediction 315 397 - -
Tsu07g02342 840 PANTHER DUF630 FAMILY PROTEIN 1 840 - -
Tsu07g02342 840 Coils Coil 323 346 - -
Tsu07g02342 840 Pfam Protein of unknown function (DUF632) 415 744 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02342 Tsu-Chr7 26656981 26661590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02342 501 751 Acyl Lipid Metabolism Gene Families AT2G27090 37.008 1.09e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02342 - - mtr:MTR_2g036920 1255.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04587 04 53457947 53461475 Tsu07g02342 07 26656981 26661590 PCT