Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02306 ATGTTGCTAACCGCAGCGGAAAAGAGACCCCATCCAGTATTACTTCAGGCTTTCCTCGCGGAACGCAACGGTTTCGGTAAACGAAGCTACGGGATTTTTCATCGATTCTCCGCAAACTATCATCACTGTCAAGGAAggtgttttattatttatattttagataCAATGTCATCGAATTCAAAATACCCGATTTTGGACGATAAGCCCATTAACCAGTGGAAGGTTACAGCGCTGAAAGAGGAACTGAAGAGAAGGAAGCTAGCTACAAAAGGTTTAAAGGAAGATTTAATTAATCGTTTGGATGAAGCCCTTCGCAATGAAAGGGAGACTGCTGAGGCTTCCCCTGAAAAGGAGGCTGCTGTGGGTTCGGAGAAGGATGAGGCTAATGGTTTAAACGCTCAAGTAGATGGGGTAAAAGATTCACAGACTGCTAATGTGGACGCTGAAGTCGTTGATACCATTGAAAAGGGAAATTTccaaacatttgaaaattatgAACAGGGGAATAATGATGTAGTTAAGGTTTCAGAGGTTGTTGATGACAGTATTAAGAATGTGGAGCAGGATGGTGTTACCGACCCAGTTGACGTTAGTAATAGTGTGTCAGCCATGGATGTAGATGGCAAACATGCAGTTTTGCCTGTTGGTGTTGAATCTGCTAATGTGGGAGAGGAGGTAGTTGCCAATCCTTCTACTGTGGAGACCTCTGTTACGGTCACTGAGACTGTGGTAACCGAGACTGTGTCAACAGAGGTAGTAGTCAGTGGTCAGGATTCTTATAGTTCAGAGAAGAATAATGAGGATTCAGCCATCAAGCCAGAGAATGAGGAATCAAAGGAGCAGCTGGACATTGAGGACTCAAAGCCCCAATTGGAGTCTGACACAAAGCCCCCATCTGACGATCCCGTCCCCGACTCTTCTGCACCAGAAAACCAGGTATCTGAGGTCAACCCTAGTTTAGGGTCTCAAGTAAAATCTGATTCTTTTTCTACTGATTCTGTGTCAATTAATCAAAAGAATGAACTAAAGGATACTATAATTGCTAATAATAATGTCAAATTAGAACAAGATAATGTTAGGCCGGAGATGGTGGAAGAACCATCATCCAGAAATGTACCTGTTTATGATGAATTGCATTCAATGGATGTTGGAGGGCTGCATGAAAAAAAGTCATCTGTTGAAGAAAATAACAACAATGTTACAAGTCCAGACTTGAACAAAACCAATAGTAGTGATGATGTAGGGTATCCAGAAAAGTTGAACTTGGACAGAAGTTCTGGTGATGATTCCATGGAAGAGGACTTGCCTGAGACTAGGCAATATGATTCTAAGTTTAATGTTGATGAACTTGTAGACAAAGTTGAGAATAATGAAGTCCCTATGGTCAAGGAGGAAAGGAATACAACAGATGTGGGAGATGGTGTATCCGCAAGAAAAAGTGATACCCACCAAGATATTGATATTAGTCCTGTTTCCCTGACTGAGAAGCGAAAATATCCTGaacaaACATTAGTTGCGAACATTGAGCCTGCAAAAAGGCAGCGCAGGTGGAACACTGAAACAGTTAAAGGATCAGATCTGCAAAGCACTACTCCCAGATCTGCTACTACACCCAAGGATGGGCCAATTGCTCTGAAGCGCAACTTCTCTAGGTCTAATTCCTCTGCAACCGATGATACCCCAAAAGAACGCATTGTTCCACCATCTCGAAGGACCCCAACTAATTCTCTCAGGATTGATCAATTCCTTCGTCCATTTACCCTAAAAGCAGTGCAAGAACTTCTTGGCAAAACTGGGAGTGTTAGCAGTTTCTGGATGGACCAAATAAAGACCCATTGCTATGTTACTTACTCGTCCATCGAAGAGGCCACTGAGACACGGAATGCTGTGTATAATTTGCAATGGCCTCCAAATGGTGGGCGACTCTTAGTTGCTGAATATGTTGATCCTGAAGAAGTGAAAATGAAGTTAGAAGCTCCTCCTATCCCAACTGCACCTGTCATCAGTGTTCCAACAGTTCCTCCCGCACCACCTTCACAGCCAGAGCCTTCCCCACGTCAGCAGAGGGAGCAGCATCTGCCAGTTACTCTCCCACCTCCACCTCCATTGTCAAGGCCCCCACCAGTTGCAAGGGAACGTCTTCCATCCCCCCCACCCCTTCCTGAGAAAGCAGACCCACCTATTGTCACTCTGGATGATCTCTTCCGCAAAACCAAAGCAACTCCTCGTATCTATTATTTACCCTTGTCTGAAGAGCAAGTTGCTGCAAAACTTGCGGCACAGGGTAAAAATACGAGGCAGTAG 2304 0.4353 MLLTAAEKRPHPVLLQAFLAERNGFGKRSYGIFHRFSANYHHCQGRCFIIYILDTMSSNSKYPILDDKPINQWKVTALKEELKRRKLATKGLKEDLINRLDEALRNERETAEASPEKEAAVGSEKDEANGLNAQVDGVKDSQTANVDAEVVDTIEKGNFQTFENYEQGNNDVVKVSEVVDDSIKNVEQDGVTDPVDVSNSVSAMDVDGKHAVLPVGVESANVGEEVVANPSTVETSVTVTETVVTETVSTEVVVSGQDSYSSEKNNEDSAIKPENEESKEQLDIEDSKPQLESDTKPPSDDPVPDSSAPENQVSEVNPSLGSQVKSDSFSTDSVSINQKNELKDTIIANNNVKLEQDNVRPEMVEEPSSRNVPVYDELHSMDVGGLHEKKSSVEENNNNVTSPDLNKTNSSDDVGYPEKLNLDRSSGDDSMEEDLPETRQYDSKFNVDELVDKVENNEVPMVKEERNTTDVGDGVSARKSDTHQDIDISPVSLTEKRKYPEQTLVANIEPAKRQRRWNTETVKGSDLQSTTPRSATTPKDGPIALKRNFSRSNSSATDDTPKERIVPPSRRTPTNSLRIDQFLRPFTLKAVQELLGKTGSVSSFWMDQIKTHCYVTYSSIEEATETRNAVYNLQWPPNGGRLLVAEYVDPEEVKMKLEAPPIPTAPVISVPTVPPAPPSQPEPSPRQQREQHLPVTLPPPPPLSRPPPVARERLPSPPPLPEKADPPIVTLDDLFRKTKATPRIYYLPLSEEQVAAKLAAQGKNTRQ 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02306 767 Coils Coil 93 113 - -
Tsu07g02306 767 MobiDBLite consensus disorder prediction 388 442 - -
Tsu07g02306 767 MobiDBLite consensus disorder prediction 417 442 - -
Tsu07g02306 767 ProSiteProfiles SAP motif profile. 70 104 IPR003034 -
Tsu07g02306 767 MobiDBLite consensus disorder prediction 305 336 - -
Tsu07g02306 767 MobiDBLite consensus disorder prediction 664 729 - -
Tsu07g02306 767 MobiDBLite consensus disorder prediction 521 537 - -
Tsu07g02306 767 Gene3D SAP domain 54 120 IPR036361 -
Tsu07g02306 767 MobiDBLite consensus disorder prediction 106 139 - -
Tsu07g02306 767 MobiDBLite consensus disorder prediction 664 684 - -
Tsu07g02306 767 MobiDBLite consensus disorder prediction 357 376 - -
Tsu07g02306 767 SUPERFAMILY SAP domain 70 107 IPR036361 -
Tsu07g02306 767 MobiDBLite consensus disorder prediction 253 336 - -
Tsu07g02306 767 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 59 765 - -
Tsu07g02306 767 SMART sap_9 70 104 IPR003034 -
Tsu07g02306 767 SUPERFAMILY RNA-binding domain, RBD 568 655 IPR035979 GO:0003676
Tsu07g02306 767 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 59 765 - -
Tsu07g02306 767 MobiDBLite consensus disorder prediction 106 124 - -
Tsu07g02306 767 Pfam SAP domain 70 104 IPR003034 -
Tsu07g02306 767 MobiDBLite consensus disorder prediction 395 415 - -
Tsu07g02306 767 CDD RRM_ACINU 574 658 IPR034257 -
Tsu07g02306 767 Pfam RNSP1-SAP18 binding (RSB) motif 721 764 IPR032552 -
Tsu07g02306 767 MobiDBLite consensus disorder prediction 265 299 - -
Tsu07g02306 767 MobiDBLite consensus disorder prediction 518 573 - -
Tsu07g02306 767 MobiDBLite consensus disorder prediction 694 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02306 Tsu-Chr7 26118402 26122130 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02306 K12875 - gmx:100786288 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02306 07 26118402 26122130 Tsu07g02306 07 26118402 26122130 ECH
Tsu02g00770 02 6448549 6453101 Tsu07g02306 07 26118402 26122130 ECH