Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01884 ATGGAGGAGGAAGAGGAGACAAGCCAGTGGAAACAAGCTATGATTAATTCTACAGCCGGGGCTATTTCTGGTGGTATATCAAGGACAGTTACATCACCTCTTGATGTTATTAAGATTAGATTTCAGGTTCAACTAGAGCCCACTTCCTCATGGCCGTCACTACGCAAGGACTTGTCTACACCCTCAAAATATACTGGCATGTTTCAAGCAACTAAAGATATTTTTAGAGAAGAAGGCTTACGGGGTTTTTGGCGGGGTAATGTGCCAGCTTTGCTCATGGTTATGCCATATACGGCTATACAGTTTACTGTTCTACACAAATTGAAGACTTTTGCCTCTGGTTCATCCAAGACAGAGAATCACATTAATCTGAGCCCTTATCTATCCTATGTAAGTGGAGCATTAGCTGGGTGTGCAGCTACTGTAGGGTCATATCCATTTGATCTTCTTCGAACTATATTAGCTTCTCAGGGTGAACCTAAGGTATATCCAAACATGAGTTCAGCAGCCATTCATATTCTCCGGACCCGTGGGTTTCGAGGCTTGTATTCCGGATTGTCACCGACGCTAGTTGAGATTATACCTTATGCAGGCCTACAATTTGGCACTTATGATACATTCAAACGATGGGCCATGGCGTGGAACCATGTTCAATATTCAAATACTGCTGCAGAAGATAGCCTCTCTAGCTTTCAGCTTTTCCTGTGTGGACTAGCAGCAGGAACATGTGCCAAGCTTGTCTGTCATCCACTTGATGTAGTCAAGAAAAGATTTCAGGTAGTTTTAGAATGTGGAATGCAAAATCATAAAACTAAGTAA 819 0.4249 MEEEEETSQWKQAMINSTAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWPSLRKDLSTPSKYTGMFQATKDIFREEGLRGFWRGNVPALLMVMPYTAIQFTVLHKLKTFASGSSKTENHINLSPYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPNMSSAAIHILRTRGFRGLYSGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNHVQYSNTAAEDSLSSFQLFLCGLAAGTCAKLVCHPLDVVKKRFQVVLECGMQNHKTK 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01884 272 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Tsu07g01884 272 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Tsu07g01884 272 PRINTS Mitochondrial carrier protein signature 139 157 IPR002067 GO:0055085
Tsu07g01884 272 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Tsu07g01884 272 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085
Tsu07g01884 272 PRINTS Mitochondrial carrier protein signature 86 106 IPR002067 GO:0055085
Tsu07g01884 272 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 210 IPR018108 -
Tsu07g01884 272 Gene3D Mitochondrial carrier domain 7 272 IPR023395 -
Tsu07g01884 272 SUPERFAMILY Mitochondrial carrier 10 261 IPR023395 -
Tsu07g01884 272 Pfam Mitochondrial carrier protein 125 211 IPR018108 -
Tsu07g01884 272 Pfam Mitochondrial carrier protein 228 261 IPR018108 -
Tsu07g01884 272 Pfam Mitochondrial carrier protein 10 112 IPR018108 -
Tsu07g01884 272 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 111 IPR018108 -
Tsu07g01884 272 PANTHER SOLUTE CARRIER FAMILY 25 7 269 - -
Tsu07g01884 272 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 7 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01884 Tsu-Chr7 19033084 19040520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01884 3 269 Organic Solute Cotransporters AT3G21390 71.587 4.01e-139 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01884 K15108 - gmx:100783563 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01884 07 19033084 19040520 Tsu07g01884 07 19033084 19040520 ECH
Tsu04g04229 04 50551183 50556215 Tsu07g01884 07 19033084 19040520 PCT