Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01883 ATGGAATATAGAACCTTAGAACTCAACATAATTTCCGCAAAAGATCTCAAAGATGTTAACGTCTTCTCCAAGATGGATGTATACGCTGTCGTTTCAATCTCCGGCGATCCAGTTAATCCACAAACTGCCAAAACCAATATCCACCGTGACGGTGGAAAAAACCCTACCTGGAATTTTCCTGTCAAATTTACAATCAATGAATCTCTCGCTAATCAGAATCGTCTTTCTCTTGAAATTAAACTTATTTCCGATCGTACCCTTGCTGGAGATACTATAATTGGTACCGTTCATATTCCTATGAAAGAGCTTCTTGATAATCCTGCTGGTGATTCTTTTCGGCAAGTTAGTTATCAGGTTAGAACATCTTCAGGAAAAGCTAAAGggaatttgaatctttcttaTAAATTCGGTGAACATGTTGCTGCTCCGGCGATAAAGTCGAAGAAATCGGAGAAATATGAGGAGGTTAAAGGGAAACATGAACCTGTGATGGCTTATCCACCACCTGGAGTGGCGGCTGGGTCTAGTTCGGTGCCGTATGGTACACCAtatcctccaccaccaccacaacaagCTACTGCTGGTGTTGGTTATGGATATCCACCTCCAGCAGCAGCTGCTTACGGTGGTGGCTATCCACCTGCTGGTGGTTACCCACCAGCGCAACACGGTTACCCACCTGCTCAAGCAGGTTATGGGTATCCGCCTCAAGCAGGTTATGGATATCCACCGCAGCAGGCGGGTTATGGGTATCCACCGCAACAAGGCGGTTATGGATATCCAGGGGCACAGAAACCTAAGAAGAATAAACTTGGAATGGGATTGGGAGCAGGATTGCTTGGAGGTGCTTTAGGTGGGTTGTTGATTGGAGATATGGTTTCTGATGCTGCTGATTATGATGCTGGATATGATGCTGGCTTTGATGATGGTGGCggttttgatttttag 948 0.4272 MEYRTLELNIISAKDLKDVNVFSKMDVYAVVSISGDPVNPQTAKTNIHRDGGKNPTWNFPVKFTINESLANQNRLSLEIKLISDRTLAGDTIIGTVHIPMKELLDNPAGDSFRQVSYQVRTSSGKAKGNLNLSYKFGEHVAAPAIKSKKSEKYEEVKGKHEPVMAYPPPGVAAGSSSVPYGTPYPPPPPQQATAGVGYGYPPPAAAAYGGGYPPAGGYPPAQHGYPPAQAGYGYPPQAGYGYPPQQAGYGYPPQQGGYGYPGAQKPKKNKLGMGLGAGLLGGALGGLLIGDMVSDAADYDAGYDAGFDDGGGFDF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01883 315 SMART C2_3c 5 112 IPR000008 -
Tsu07g01883 315 CDD C2_SRC2_like 5 132 IPR044750 GO:0006952
Tsu07g01883 315 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Tsu07g01883 315 Gene3D C2 domain 4 137 IPR035892 -
Tsu07g01883 315 PANTHER PROTEIN SRC2 1 260 - -
Tsu07g01883 315 Pfam C2 domain 5 107 IPR000008 -
Tsu07g01883 315 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 138 IPR035892 -
Tsu07g01883 315 PANTHER INGRESSION PROTEIN FIC1 1 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01883 Tsu-Chr7 19007911 19009731 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01883 - - mtr:MTR_2g436900 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01883 07 19007911 19009731 Tsu07g01883 07 19007911 19009731 ECH
Tsu04g04230 04 50560539 50561755 Tsu07g01883 07 19007911 19009731 PCT