Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu04g04230 | ATGGAACAAAAAACCTTACATCTCAACCTCACATCAGCAAAAGATCTCAAAAACGTTAACCTATTCGCCAAAACGGAAGTATACGCCGTCGTTTCAATCTCCGGTGATCCTCTCCATAACCAGAAAGCTAAAACACCTGTTGACAGAGAAGGAGGCACTAACCCTGCTTGGAATTTCTCAGTTCAACTCACTTTCAACGAATCTCTCGCTCGTCAGAACCGTTTGACTCTCGAAATTAAGCTCCGTTGTTTGCGAAACCTATCCGTCGATAAAGACATCGGAAGCGTTCAAATACCTCTTGGAGAGCTTCTTAACCAAATCGGTGACGGAAAATCATTTCAACATGTTAGTTATCAAGTTAAAAAACCTTCCGGAAAACCAAAAGGTGCGTTCAATTTTTCATACAAATTCACTGCCCCGCTGAAATCCAAGGTGGAACCGGGTTACAGTGCTCCGGCTCCGGCGGTGGGGTCTACTTCTGCGCCTTACCCGGCCGCATATGCTGCTCCTCCTCAGCAAGAATACTCGGCCGGATATGGATATCCACAGTCGTACGATGGGTATCAACAAACTCAAGTGGGTTATGGATACCCGCAACAATCCAATTATGGTTACCCGCCACAAAACAGTTACGGTTATCCGCAACAAAGCGGATATGGGTACCCGATCCAACAGGCTATTCCGGTTCAGAAACCCGGAAAGAGTAATCTTGGAATGGGAATGGGAGCTGGATTGATTGGAGGAGCTTTGGGTGGACTTTTGATTGGGGATATGATATCTGATGGATTTgggttttaa | 798 | 0.4536 | MEQKTLHLNLTSAKDLKNVNLFAKTEVYAVVSISGDPLHNQKAKTPVDREGGTNPAWNFSVQLTFNESLARQNRLTLEIKLRCLRNLSVDKDIGSVQIPLGELLNQIGDGKSFQHVSYQVKKPSGKPKGAFNFSYKFTAPLKSKVEPGYSAPAPAVGSTSAPYPAAYAAPPQQEYSAGYGYPQSYDGYQQTQVGYGYPQQSNYGYPPQNSYGYPQQSGYGYPIQQAIPVQKPGKSNLGMGMGAGLIGGALGGLLIGDMISDGFGF | 265 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu04g04230 | 265 | Pfam | C2 domain | 5 | 106 | IPR000008 | - | |
| Tsu04g04230 | 265 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 4 | 138 | IPR035892 | - | |
| Tsu04g04230 | 265 | SMART | C2_3c | 5 | 112 | IPR000008 | - | |
| Tsu04g04230 | 265 | Gene3D | C2 domain | 3 | 139 | IPR035892 | - | |
| Tsu04g04230 | 265 | PANTHER | OS01G0934100 PROTEIN | 1 | 261 | - | - | |
| Tsu04g04230 | 265 | ProSiteProfiles | C2 domain profile. | 1 | 115 | IPR000008 | - | |
| Tsu04g04230 | 265 | PANTHER | INGRESSION PROTEIN FIC1 | 1 | 261 | - | - | |
| Tsu04g04230 | 265 | CDD | C2_SRC2_like | 5 | 133 | IPR044750 | GO:0006952 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu04g04230 | Tsu-Chr4 | 50560539 | 50561755 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu04g04230 | - | - | aprc:113847350 | 302.367 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu04g04230 | 04 | 50560539 | 50561755 | Tsu07g01883 | 07 | 19007911 | 19009731 | PCT |