Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01866 ATGGATCCACAACCAAAACCACCTTCACCACAACCTTTGAAATATCAGacATGGTTCTTGAAAGTTTCTATCCATTGTGAAGGTTGCAAAAACAAAGTAAAGAAAGTTTTGAAGCGCATTGATGGTGTTTTCACTGCAACAATTGattcacaacaacaaaaagtaaCAGTAACTGGAAATGTTGCTGTTGAGACCCTTTTAAGGAAGCTGGTTAAAGCCGGAAAACATGCCGAGATTTGGCCGGAGAATATCAACGGGAAAGGAAAAAGCTCCGgcaaagagaagaagaaggataAGAATGAACCAAAAGAACCACAAAGCTTGCAAAACAAGGGAACTGAAAGTGTTGCCAAAAAGTGTGAAAATGTTGgcaaaaacaagaacaaaaaatcaaattccgGCACCGGAGAGTCGCCGGAAAAGTTACCGGCCGGTGACAATGTTCCTCCGGTGAGTGGTGGTGGAGGGGGTTCtgctaagaagaagaaaaagaaagatggGTGTGGTGGTGGAAATGGAAATGAAAGTAGTAATGGTTTGAGCACAGTAGCTAAGAGTGGACCAGCACACACCGGATTCCAATTTCAGAATCCTGGTCAGGGTATGGCCCACCAAATGAATCTCAGCCCTACACGTCAGCAATCATTCTTGTATTCATCAGAAACAGGGTACCCTCCAATGGCTTATATCTCATCAGCTTACCATAGATTATATCCTATGGGAAGAGTTTGTGATCCTTCTTATTATGTTCCATCTACACCCTACACGTGTCCTCCTAGCCTAGTAGATCAATATCACTATGGTGCTTATCAACTTCAATCAGGACCGTTGGTTCCTTTTGAGTATTTTAGTGATGAAAATACTAATGGGTGTTCTATTATGtga 885 0.3797 MDPQPKPPSPQPLKYQTWFLKVSIHCEGCKNKVKKVLKRIDGVFTATIDSQQQKVTVTGNVAVETLLRKLVKAGKHAEIWPENINGKGKSSGKEKKKDKNEPKEPQSLQNKGTESVAKKCENVGKNKNKKSNSGTGESPEKLPAGDNVPPVSGGGGGSAKKKKKKDGCGGGNGNESSNGLSTVAKSGPAHTGFQFQNPGQGMAHQMNLSPTRQQSFLYSSETGYPPMAYISSAYHRLYPMGRVCDPSYYVPSTPYTCPPSLVDQYHYGAYQLQSGPLVPFEYFSDENTNGCSIM 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01866 294 MobiDBLite consensus disorder prediction 81 206 - -
Tsu07g01866 294 CDD HMA 20 78 IPR006121 GO:0046872
Tsu07g01866 294 MobiDBLite consensus disorder prediction 171 206 - -
Tsu07g01866 294 Pfam Heavy-metal-associated domain 22 76 IPR006121 GO:0046872
Tsu07g01866 294 MobiDBLite consensus disorder prediction 88 105 - -
Tsu07g01866 294 ProSiteProfiles Heavy-metal-associated domain profile. 23 79 IPR006121 GO:0046872
Tsu07g01866 294 Gene3D - 14 79 - -
Tsu07g01866 294 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 11 294 - -
Tsu07g01866 294 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 11 294 - -
Tsu07g01866 294 SUPERFAMILY HMA, heavy metal-associated domain 14 81 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01866 Tsu-Chr7 18711511 18712827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01866 - - mtr:MTR_2g436830 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01866 07 18711511 18712827 Tsu07g01866 07 18711511 18712827 ECH
Tsu04g04234 04 50580835 50582767 Tsu07g01866 07 18711511 18712827 PCT