Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04234 ATGAATGATATCGGAGGGCAGAGGAAAGCAGAAGCAGTGTTACTTCTTCTGTCATTGTCACATTATACTTTCATACCCATCCATCTTGGCCTGCTTCATTTCCttaccattttcttcttctcactTTCAACTtttcaaaaccaccaccacTTCTCTCTAATGGATGTTACCTCACAACCATTGAAGTATCAGACATGGTTCTTGAAAGTTTCTATCCACTGTGAAGGTTGTAAGAGAAAAGTAAAGAAAGTTCTTCAAAGCATTGAAGGAGTTTTTACTACAACAATAGATCCACAGCAGCAAAAAGTAACTGTTACCGGAAATGTTGCTGTTGAGACTCTGATAAGGAAACTAGCCAAAGCCGGAAAACATGCCGAGGTTTTGCCGGAGAATGTTCCAGGGAAAGGAAAGGATTCCAACAAAGCTAGGAACAATAAGAAGAGTGAACAGAAAAACCAAGAAACTCAGCAAAAGCAAAACCACTCTTCTGCAAATAGTACTGAATCTAACCATGGTTCTGTCAAAAATAGAGGAACTGAAAATGCTGAAAAATGCAAAGGTGAAAACAATAGTAGTAGCAACACAAAAACTAAGGGGTTGCCGGAGAAGTCTCCGGCAGGCGGTAAGGGACAGGAAGCAGAAAACAAAGGTGGTCAAACTGGTGGAGGAGATTCTGgtaagaaaaagatgaagaaagttCAGAGTGTTGGTGGAACTGGAACAGGAAACAATGGGTTGAGTTCAGCATCTACTGGTGCACCAGCAAACACAGGATCAGAATTCCAGTATCCAGGTCAGGTTGTAGGACAAGTGAATCTCAGCCCTACACGTCAGCAACCGTACATGTTTTATCCAGAAACATGTTATCCTCCTTTGGTACAGTATGCAACTTACAACAGATTATGTCCCATTGGAACAATGGCTTGTCCTTCTTACTATGTTCCACCATTACCCTACATGTGTTCAGGCCTTGACCGTGACCCTTATCATCAGTTCCAATCTGCACCTTTGATTCCCTTTGAGTTCTTCAGTGATGAAAATGCAAATGGATGTTCTATTATGTAA 1065 0.3925 MNDIGGQRKAEAVLLLLSLSHYTFIPIHLGLLHFLTIFFFSLSTFQNHHHFSLMDVTSQPLKYQTWFLKVSIHCEGCKRKVKKVLQSIEGVFTTTIDPQQQKVTVTGNVAVETLIRKLAKAGKHAEVLPENVPGKGKDSNKARNNKKSEQKNQETQQKQNHSSANSTESNHGSVKNRGTENAEKCKGENNSSSNTKTKGLPEKSPAGGKGQEAENKGGQTGGGDSGKKKMKKVQSVGGTGTGNNGLSSASTGAPANTGSEFQYPGQVVGQVNLSPTRQQPYMFYPETCYPPLVQYATYNRLCPIGTMACPSYYVPPLPYMCSGLDRDPYHQFQSAPLIPFEFFSDENANGCSIM 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04234 354 MobiDBLite consensus disorder prediction 185 200 - -
Tsu04g04234 354 CDD HMA 68 126 IPR006121 GO:0046872
Tsu04g04234 354 MobiDBLite consensus disorder prediction 122 261 - -
Tsu04g04234 354 MobiDBLite consensus disorder prediction 236 261 - -
Tsu04g04234 354 SUPERFAMILY HMA, heavy metal-associated domain 62 128 IPR036163 GO:0046872
Tsu04g04234 354 Gene3D - 62 127 - -
Tsu04g04234 354 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 56 354 - -
Tsu04g04234 354 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 56 354 - -
Tsu04g04234 354 Pfam Heavy-metal-associated domain 70 124 IPR006121 GO:0046872
Tsu04g04234 354 MobiDBLite consensus disorder prediction 155 176 - -
Tsu04g04234 354 ProSiteProfiles Heavy-metal-associated domain profile. 71 127 IPR006121 GO:0046872
Tsu04g04234 354 MobiDBLite consensus disorder prediction 136 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04234 Tsu-Chr4 50580835 50582767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04234 - - mtr:MTR_4g119820 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04234 04 50580835 50582767 Tsu07g01866 07 18711511 18712827 PCT