Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01847 ATGGGTATGACAACTAGCAATCGGAAACGCTCTGAAGAATGTATGTCCGTAAATTACACTCTCTCTTCTCCACCTTCATCAAATTACCACAGAAAAAGACCCAAATTTTCATCGGATTTAACAACCCGACCCGGTTCTATTTCACACAGCGTCGTTTCAAGAATCTCTCGTTACCCTGACGCTAAACCACCGTTTGTTCGTGAAGTTCACGCGCCTTGCAGACCtaaaaaattcaactttgcCAGAAAATTATCGAGCTTCGTTTCCAACGATATTATGGGGAATTTTCTGGTGAGGAATTATGAAAAAGCGAAACTTTCTGCATTGGGGAAATGTAGATTGGCGTCTAAGAAGGAAACTGTGGTGATTGATTTGGATGGGGAGAATAGTGATGGTCGTTCGGATGATTCCGGTGTGGTTGAGGTTGTTGATGTTCGTGATTCGGATGCTAAAGTTGATGAATTGGAGGATATGGTTATTGAAAATGGTGTTCCACGGCGGTCAATTTCGTCGCCGGATTCTGCTTTGACTAAAGCTATTGTGGATTTGGAGGAACATGATTTTTCTAGTGTTCATGTGTATAAGAAGTTGCTTGAAGGTGTTCAGAGAAGAACTGATACTATtcagaatttgaattttgaaattgaacTCAATGAGAAGAGGAGAGAAACTTTTCAATTGTTGCGTCCTAAGAAAGAAATTGTTGAgGAAATTCCGTTTGAGCCTTTTGTCCCTCTAACGGATGATGAAGAACATGAGGTTTCTCGCGCGTTTTCTACCAACCGGAAGAAGATATTGGTTACGCATGAGAGTTCTAATATTGAGATAGCGGGAGAAAAGATTCGGTGTCTTCTTCCGGGTGCATGGTTAAATGATGAGGTGATAAATTTGTATCTTGAGTTGCTGAAAGAAAGGGAGCGAAGAGAACCAAAGAAGTTTCTgaaatgtcattttttcaacACCTTTTTCTACAAAAAGTTCAAGGATGGATATGATTACAAATCTGTCCGAAGATGGACGAGTCCAAGGAAATTGGGATACAACCTATTTGATTGTGATAAAATATTTGTACCCATCCATCAAGAAATTCACTGGTGCCTTGCggttattaataaaaaagatgCAAAATTCCAGTATCTTGACTCATTGAAAGGAAGGGATAACCGTGTGCTAACAGTGCTGGCTAGATACTTCGTAGACGAAGTAAAGGACAAAACTGGAAAAGATATTGATGTTAGCACTTGGGATAGAGAATTTGTGGATGACCTTCCTGAGCAGGAAAATGGGTTCGACTGCGGTGTATTTATGATCAAATATGCCGACTTTTATAGCAGAGGCCTGGGGCTATGTTTTAACCAGGAGCACATGCCTTACTTTCGGCGCAGGACAGCTAAAGAGATATTGAGATTGAGAGCTGACTAA 1422 0.3896 MGMTTSNRKRSEECMSVNYTLSSPPSSNYHRKRPKFSSDLTTRPGSISHSVVSRISRYPDAKPPFVREVHAPCRPKKFNFARKLSSFVSNDIMGNFLVRNYEKAKLSALGKCRLASKKETVVIDLDGENSDGRSDDSGVVEVVDVRDSDAKVDELEDMVIENGVPRRSISSPDSALTKAIVDLEEHDFSSVHVYKKLLEGVQRRTDTIQNLNFEIELNEKRRETFQLLRPKKEIVEEIPFEPFVPLTDDEEHEVSRAFSTNRKKILVTHESSNIEIAGEKIRCLLPGAWLNDEVINLYLELLKERERREPKKFLKCHFFNTFFYKKFKDGYDYKSVRRWTSPRKLGYNLFDCDKIFVPIHQEIHWCLAVINKKDAKFQYLDSLKGRDNRVLTVLARYFVDEVKDKTGKDIDVSTWDREFVDDLPEQENGFDCGVFMIKYADFYSRGLGLCFNQEHMPYFRRRTAKEILRLRAD 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01847 473 SUPERFAMILY Cysteine proteinases 242 471 IPR038765 -
Tsu07g01847 473 Gene3D Adenoviral Proteinase; Chain A 243 471 - -
Tsu07g01847 473 MobiDBLite consensus disorder prediction 1 31 - -
Tsu07g01847 473 Pfam Ulp1 protease family, C-terminal catalytic domain 289 467 IPR003653 GO:0006508|GO:0008234
Tsu07g01847 473 ProSiteProfiles Ubiquitin-like protease family profile. 274 443 IPR003653 GO:0006508|GO:0008234
Tsu07g01847 473 MobiDBLite consensus disorder prediction 1 44 - -
Tsu07g01847 473 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 189 471 - -
Tsu07g01847 473 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 1 151 - -
Tsu07g01847 473 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 189 471 - -
Tsu07g01847 473 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01847 Tsu-Chr7 18525116 18532882 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01847 K08592 - mnt:21406275 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01847 07 18525116 18532882 Tsu07g01847 07 18525116 18532882 ECH
Tsu04g04246 04 50660077 50666634 Tsu07g01847 07 18525116 18532882 PCT