Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01794 ATGGATGCCGTGACATTGTCGGCAGAATTCCCTAGCACCGTTGAGGCAGCGAGGATGTTCAAGGCTTTGATCCTTGATGCACCAAACCTCCTTCCCAAGCTTATGCCGGCTATTAAGAGTATTCAACTTGTTGAAGGCAACGGTGGCCCCAGAAGTATTCAAAAGATCACCATTGTTGAAGGTGATAACATCAAATACGTGAAGCATAGAATTGACGCCATAGACAAAGAGAAATTGATATATAATTATGCAGTGATCGAGGGCGATGCTAAACCGGAAATGCTGGAATTGATTTCCCATGAGGTCAAGATTGAGCCTACCAAAGAGGGTGGTTGCAAGATCAAGAGTGTTAGCAAGTATTATCCCAAAAAAGGGATTGAGATCAAAGAAGAGGATTTGAAGGATGGCAGGGAAGAAGCATTGGTGATTCTCAAGGGAGTTGATGCATATCTTGTGGGTAACCCACAAGCCTATGCTTGA 480 0.4396 MDAVTLSAEFPSTVEAARMFKALILDAPNLLPKLMPAIKSIQLVEGNGGPRSIQKITIVEGDNIKYVKHRIDAIDKEKLIYNYAVIEGDAKPEMLELISHEVKIEPTKEGGCKIKSVSKYYPKKGIEIKEEDLKDGREEALVILKGVDAYLVGNPQAYA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01794 159 PANTHER PR-10 TYPE PATHOGENESIS-RELATED PROTEIN-RELATED 1 159 - -
Tsu07g01794 159 Gene3D - 3 157 IPR023393 -
Tsu07g01794 159 PANTHER - 1 159 - -
Tsu07g01794 159 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01794 159 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01794 159 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01794 159 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01794 159 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01794 159 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01794 159 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01794 159 CDD Bet_v1-like 5 151 - -
Tsu07g01794 159 Pfam Pathogenesis-related protein Bet v 1 family 4 151 IPR000916 GO:0006952
Tsu07g01794 159 SUPERFAMILY Bet v1-like 4 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01794 Tsu-Chr7 17760519 17761548 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01794 - - gmx:100814569 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01794 07 17760519 17761548 Tsu04g04277 04 50912477 50913832 PCT