Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01755 ATGACACTATCACCAATCTCACTCTCTTCCACTTACACCACCACCATTACTCCACCACGTCACTGTTCCCTCTTCAACACCACCACTACAACAACTGCCACGTCACTCAATCTCCGATTCTGTTCTCTCAAACATTCAACCTTCGCTTTCACTTCACTCCACATTCGCTCACATCACAACAATCCCTTCCGTCGGAATCACTTCAATGCAATATCCGCCGCACTTTCTGATAACGGTACTGCTCCTAAATCATTCGATTATGATTTGCTTATTATTGGTGCTGGTGTTGGTGGTCACGGTGCCGCTCTTCACGCCGTCGAGAAgGGTTTGAAAACAGCTGTTGTTGAGGGAGACGTGGTGGGAGGGACATGCGTGAACAGAGGCTGTGTTCCTTCTAAAGCTCTTTTGGCTGTAAGTGGTCGAATGCGAGAGCTGCGGAATGATCATCACTTGAAATCACTCGGTATACAGGTTTCTAATGCTGGGTACGACAGACAAGCAGTTGCTGACCATGCTAATAATCTTGCTTCTAAAATTCGCGGTAACTTGACAAACTCGATGAAAGCACTTGGAGTGGATATACTCACTGGTTTTGGAACTATTTTGGGTCCTCAAAAGGTGAAAGTTGGCTCTTCCAACAATGTAGTAACGGCAAAAGACATCATCATTGCAACTGGTTCTGTTCCTTTTGTTCCTAAGGGAATTGAAGTCGATGGAAAGACTGTGATCACCAGTGACCATGCACTCAAATTGGAGACAGTTCCTGATTGGATAGCAATTGTTGGAAGTGGTTATATTGGCCTTGAATTCAGTGATGTATATACGGCACTAGGAAGTGAGGTTACTTTTGTGGAAGCTTTAGATCAGCTTATGCCTGGATTTGATCCTGAAATTAGTAAGTTGGCTCAGAGGGTTCTCATAAATCCCAGGAATATTGACTATCATACTGGCGTTTTTGCATCCAAGATCACTCCTGCAAGAGATGGCAAACCTGTATTGATTGAGCTTATTGATGCAAAGACCAAGGAACAAAAGGACACTTTAGAGGTGGATGCTGCATTAATAGCAACTGGAAGGGCTCCATTCACACAAGGTCTTGGATTGGAGAATATTGATGTTGCAACACAGCGTGGTTTTGTACCCGTGGATGAGCGCATGAGAGTAATTGATGCAAATGGAAGCCTGGTCCCTCATTTATATTGTATTGGCGATGCAAATGGAAAGATGATGCTTGCTCATGCTGCCAGCGCACAAGGAATATCAGTGGTTGAACAAGTCACTGGAAGAGATCATGTGCTCAATCATTTAAGCATACCAGCTGCTTGTTTTACCCATCCTGAAATCAGCATGGTTGGATTGACAGAGCCTCAAGCAAGGGAGAAAGGTGAAAAGGAAGGTTTTGATGTAAGTGTTGCCAAAACAAGTTTTAAAGCTAACACAAAAGCCTTAGCAGAAAATGAAGGAGAGGGTCTTGCCAAGTTAATATACAGACCTGACAACGGAGAGATACTAGGAGTTCATATTTTTGGGTTGCATGCTGCAGATCTCATCCATGAGGCTTCCAATGCAATAGCATTAGGGACACGTATTCAAGATATTAAATTTGCAGTTCATGCTCATCCAACTTTGTCTGAGGTGCTTGATGAACTATTTAAATCAGCAAAGGTGAACTTTCTATAA 1680 0.4321 MTLSPISLSSTYTTTITPPRHCSLFNTTTTTTATSLNLRFCSLKHSTFAFTSLHIRSHHNNPFRRNHFNAISAALSDNGTAPKSFDYDLLIIGAGVGGHGAALHAVEKGLKTAVVEGDVVGGTCVNRGCVPSKALLAVSGRMRELRNDHHLKSLGIQVSNAGYDRQAVADHANNLASKIRGNLTNSMKALGVDILTGFGTILGPQKVKVGSSNNVVTAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLETVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFASKITPARDGKPVLIELIDAKTKEQKDTLEVDAALIATGRAPFTQGLGLENIDVATQRGFVPVDERMRVIDANGSLVPHLYCIGDANGKMMLAHAASAQGISVVEQVTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKGEKEGFDVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKSAKVNFL 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01755 559 PIRSF Hg-II_reductase_MerA 49 552 IPR001100 GO:0016491
Tsu07g01755 559 Gene3D - 230 357 IPR036188 -
Tsu07g01755 559 TIGRFAM lipoamide_DH: dihydrolipoyl dehydrogenase 87 554 IPR006258 GO:0004148|GO:0050660
Tsu07g01755 559 Gene3D - 437 557 IPR016156 GO:0016491|GO:0050660
Tsu07g01755 559 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 437 551 IPR016156 GO:0016491|GO:0050660
Tsu07g01755 559 Gene3D - 87 420 IPR036188 -
Tsu07g01755 559 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 438 549 IPR004099 GO:0045454
Tsu07g01755 559 PANTHER DISULFIDE OXIDOREDUCTASE 14 558 - -
Tsu07g01755 559 SUPERFAMILY FAD/NAD(P)-binding domain 68 428 IPR036188 -
Tsu07g01755 559 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 121 131 IPR012999 GO:0016668
Tsu07g01755 559 PRINTS Pyridine nucleotide disulphide reductase class-I signature 221 230 - -
Tsu07g01755 559 PRINTS Pyridine nucleotide disulphide reductase class-I signature 257 282 - -
Tsu07g01755 559 PRINTS Pyridine nucleotide disulphide reductase class-I signature 88 110 - -
Tsu07g01755 559 PRINTS Pyridine nucleotide disulphide reductase class-I signature 525 545 - -
Tsu07g01755 559 PRINTS Pyridine nucleotide disulphide reductase class-I signature 120 135 - -
Tsu07g01755 559 PRINTS Pyridine nucleotide disulphide reductase class-I signature 434 455 - -
Tsu07g01755 559 PRINTS Pyridine nucleotide disulphide reductase class-I signature 351 365 - -
Tsu07g01755 559 PRINTS Pyridine nucleotide disulphide reductase class-I signature 503 518 - -
Tsu07g01755 559 PRINTS Pyridine nucleotide disulphide reductase class-I signature 399 406 - -
Tsu07g01755 559 PRINTS FAD-dependent pyridine nucleotide reductase signature 218 236 - -
Tsu07g01755 559 PRINTS FAD-dependent pyridine nucleotide reductase signature 384 406 - -
Tsu07g01755 559 PRINTS FAD-dependent pyridine nucleotide reductase signature 350 366 - -
Tsu07g01755 559 PRINTS FAD-dependent pyridine nucleotide reductase signature 257 275 - -
Tsu07g01755 559 PRINTS FAD-dependent pyridine nucleotide reductase signature 89 108 - -
Tsu07g01755 559 Pfam Pyridine nucleotide-disulphide oxidoreductase 87 419 IPR023753 GO:0016491
Tsu07g01755 559 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 14 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01755 Tsu-Chr7 17311484 17318205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01755 14 556 Acyl Lipid Metabolism Gene Families AT3G16950 82.815 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01755 K00382 - gmx:100803176 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01755 07 17311484 17318205 Tsu07g01755 07 17311484 17318205 ECH
Tsu04g04299 04 51074691 51076821 Tsu07g01755 07 17311484 17318205 PCT