Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g04299 ATGCAATCCGCTCTCTCACTCTCTTTCTCTCCCACTTCATCTGCCACCACAATTTCCAGATCACGTCACTCTTTTCCACTCTCAACCGGCACCAAACCTCTCAACCTACGTTTCTGCGTTTTCAGACGCGATGCCTTGGGTTTAGGTTTTTCAACCTCTCTCACCCGTAATCTCCAGAATCAGCAGCTTCCCCGCCGTCAATACTCCGCCGTAGTTTCCGCTGTAAGCTCTGACAATGACAGCAATTTTGGATCATCCTTCGATTACGATTTTTTGAATATTGGTGCTGGTGGTCACGGTGCTACTCTTCATGCTGTTGAAAAGgttTCTTCTGCTGGGTATGATAAACAAGGAGTAGCTGATTATGCTAATAATATTGCTTCAAAAATCCGTAGTAATTTGATAAACGGAGTAGACATACTTACTGGTTTTGGTACTGATGACACGAATGACATAGACGTCACAACTGAAACAAAGGCTAGTAGTTTAGTAAGTTCTAACGGGACTCAAGATTATAGCCATTTGTGGGTTCAGTGCGAAGATTGTTATGGATTGAATTACAAGagatttttgaaagaaaaaatgaatatttgcGAACATTGTGGATATCATTTGAAAATGAGTAGTTCAGATAGACTTGAACTTTTGGTTGATCCAGGTACTTGGAATCCTTTGGATGAATACATGGTCTCTCTGGATCCCATTGAATTTAACTCAGAAGAGGACCCTTATCGTCTTGATTCTTATCAACAAAAAACGGGATTATTGGAGGCGGTTCAAACAGGCACAGGTCAACTACACGGTATTCCTTTAGCAATTGGTATTATGGAGTTTGAGTTTTTGGGGGGTAGTATGGGATCCGTAGTGGGTGAGAAAATTACTCGGTTGATCGAACATGCTACCGATCAACGTTTACCTCTTGTTATAGTATGTGCGTCCGGAGGAGCACGGATGCAAGAAGGAAGTTTGAGCTTAATGCAAATGGCCAAAATTTCTTCTGCTTTACATGAGTATCAAATCAATCAAAAGTTATTCTATGTACCGGTGCTCACATCACCTACTACTGGTGGAGTAACAGCTAGTTTTGGGATGTTGGGGGATATTGTTATTGTCGAACCAGACGCAACCATTGCATTTGCAGGTAAAAGAGTAATTGAACAAACGTTGAATCTAGAAGTGCCCGAAGGTTCACAATCGgctgaatttttatttgaaaaggGTTTATTTGATGCTATAGTACCGCGGAATCTTTTAAAGGAGGTTTTAAGTGAGCTATTTCAGTTTCATGGTTTCTTTCCTTTgattcaaaatgaaaataattag 1323 0.3915 MQSALSLSFSPTSSATTISRSRHSFPLSTGTKPLNLRFCVFRRDALGLGFSTSLTRNLQNQQLPRRQYSAVVSAVSSDNDSNFGSSFDYDFLNIGAGGHGATLHAVEKVSSAGYDKQGVADYANNIASKIRSNLINGVDILTGFGTDDTNDIDVTTETKASSLVSSNGTQDYSHLWVQCEDCYGLNYKRFLKEKMNICEHCGYHLKMSSSDRLELLVDPGTWNPLDEYMVSLDPIEFNSEEDPYRLDSYQQKTGLLEAVQTGTGQLHGIPLAIGIMEFEFLGGSMGSVVGEKITRLIEHATDQRLPLVIVCASGGARMQEGSLSLMQMAKISSALHEYQINQKLFYVPVLTSPTTGGVTASFGMLGDIVIVEPDATIAFAGKRVIEQTLNLEVPEGSQSAEFLFEKGLFDAIVPRNLLKEVLSELFQFHGFFPLIQNENN 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g04299 440 MobiDBLite consensus disorder prediction 1 24 - -
Tsu04g04299 440 PRINTS Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 350 367 IPR000438 GO:0003989|GO:0006633|GO:0009317
Tsu04g04299 440 PRINTS Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 312 330 IPR000438 GO:0003989|GO:0006633|GO:0009317
Tsu04g04299 440 PRINTS Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 278 292 IPR000438 GO:0003989|GO:0006633|GO:0009317
Tsu04g04299 440 PRINTS Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 401 410 IPR000438 GO:0003989|GO:0006633|GO:0009317
Tsu04g04299 440 PRINTS Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 379 390 IPR000438 GO:0003989|GO:0006633|GO:0009317
Tsu04g04299 440 SUPERFAMILY ClpP/crotonase 175 426 IPR029045 -
Tsu04g04299 440 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 175 440 IPR011762 -
Tsu04g04299 440 PANTHER - 168 436 - -
Tsu04g04299 440 Pfam Carboxyl transferase domain 212 391 IPR034733 -
Tsu04g04299 440 Gene3D - 175 431 - -
Tsu04g04299 440 Hamap Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 132 431 IPR000438 GO:0003989|GO:0006633|GO:0009317
Tsu04g04299 440 TIGRFAM accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 166 429 IPR000438 GO:0003989|GO:0006633|GO:0009317
Tsu04g04299 440 PANTHER ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA, CHLOROPLASTIC 168 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g04299 Tsu-Chr4 51074691 51076821 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu04g04299 148 437 Acyl Lipid Metabolism Gene Families ATCG00500 68.814 2.51e-146 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g04299 K01963 - cpap:5878364 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04299 04 51074691 51076821 Tsu07g01755 07 17311484 17318205 PCT