Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01258 atgGAAAGAAGGAGTTGGATGTGGCACAGTAAGTCATTTGAGAAAAGTTCTGCTCAAACTGATGAGACTTCTGAATCAATGTCTGAAACATTATATGATGATGATCAGGAATATGCAACTCAAACTGCTCCATTTCCGGAAGTCGAGTCCAAGGTTGCTTCAAATGAAGAGGTTGTTACTGATGTGGATACTCTAACAGAAAAACTATCCGCTGCTCTCTTAGACGTTAGTGCCAAAGAAGAATTGGTAAAGCAGAATGCCAAAGTTGCTGAAGAAGCTGTCTCagGTTGGGAGAAGTCTGAAAATGAAGTGTTCACTTTAAAACAAGAACTTGACGTTGCAAAACAGAAGAATGCGGTCCTTGAAGACCAAGTTAGTCATCTTAATGGGGAATTAAAGAATTATATGAGGCAGCTTCGACAAGCTAGAGAAGAGCAAGAGCGAAAGATCCATGAAGCTGTTGCAAATACCTCTTGTAATTGGGAATCCGAAAGACCTGATTTTGAGTGGAAAGTTGCTGAGCTTGAAGCTCAACTTCGAACAGCTAAAGAAGACGCTGCTACATCAGTTAACTCTGGTCTTCTGCAAAGGCTTGAGGATGTGGAGAGGGAGAATTCAAGTCTTAAAATTGAACTGCAATCTCGACTCGAGGAACTAGAATTCAAAACCTTTGAAAGGGATTTAAGTACCGAAGCTGCCGAAACAGCAAGCAAGCAACATTTGGAGAGTATAAATAAGGTGGCTAAGCTTGAAGCTGAGTGCCGGAGACTTAATGCTACTGCTCGCAAGACATTCTCTGCTAACGATCGCAGATCTTTGACTTACTCTTCAGTTTGCGCAGAGTCTTTCACAGATAGCATGTCAGATAGTGGAGAGAAGCTATTGATGGTTGAAAGTGATATACGCAAGTTTGGAGGCTGGGAGATAAATGAAGGTGAACCAAAGCATTATGACTCATGGCCATCTGCTTCAATTACAGAATCGGATCAATTTAAGAATGAAAACACCACTGCACAAAATCGTATAGGCCTTTCATCTCAGACCGATCTGATGGATGATTTCCTTGAAATGGAAAGGCTTGCTGCATTGCCAGATACAGAAAGTGTAAGCAGTTTCTTTGTGGTAGATACTGGAACAGACACAATGAATGCTGAAGTGGAAGCATTGGTTCAAAAGAATGCTGCATTGGAGAATAAGCTAGCAAAAATGGAGGCAGGTAAACTCGAGCTAGAGATAGATTTAAATGAGTGCCAAAAACAGCTCGAGGCATCACAAAGTCGGGTCAAGGAAGTGGAGTTGGAGGTAATTGAGCTTCAAACTCAATTATCTCTTGCAAATAAATCAAATGAAGAAGCATTTGAAGAACTAAAAGCAGCCCGAACAAAGAATGAGAAAGCTGAGTCAAAACTGAGAGCTGCTCAAACTGAGGCAGAAGAATTGATCTCAAAAATTTGTTCACTGGAGGAAGAGATCGAAAACGAGCGGACCTTGTCTTCTGAGAATTTGGCCAAGTGTGAAAAGTTGAAAGATGAGCTTTTGAGAATGAAGCAAGAGACTCAACTCCAGCAAGACACTGAAATACTGCACAGGGAAGGTGTTGATAGTGAGTTAATGTTCAAGCAGGAGAAGGAACTAGCATTGGCTGCTAGTAGATTTTCCGAGTGCCGGAAAACCATTGAATCTCTAGGACAGCAGTTGAAGTCCCTTGCAACATTGGAAGACTTCCTCCTTGATTCTGAGAATGATGTGGAGTTAACTAGTGATGTTACACAACAAAGCCCCCAAGATGGTGGTGAGCAGTTTAAACTACATAATAGCGATTTGAGTTCGCTGGAAAGTGATTCTGAATCGCCAACTTCGCTAAATCCATCTATTAGCTTTGGAAAAAGCCACTTTAGTTTTGGTAGGTTCTATTCTACAAAGGCTTAA 1929 0.4121 MERRSWMWHSKSFEKSSAQTDETSESMSETLYDDDQEYATQTAPFPEVESKVASNEEVVTDVDTLTEKLSAALLDVSAKEELVKQNAKVAEEAVSGWEKSENEVFTLKQELDVAKQKNAVLEDQVSHLNGELKNYMRQLRQAREEQERKIHEAVANTSCNWESERPDFEWKVAELEAQLRTAKEDAATSVNSGLLQRLEDVERENSSLKIELQSRLEELEFKTFERDLSTEAAETASKQHLESINKVAKLEAECRRLNATARKTFSANDRRSLTYSSVCAESFTDSMSDSGEKLLMVESDIRKFGGWEINEGEPKHYDSWPSASITESDQFKNENTTAQNRIGLSSQTDLMDDFLEMERLAALPDTESVSSFFVVDTGTDTMNAEVEALVQKNAALENKLAKMEAGKLELEIDLNECQKQLEASQSRVKEVELEVIELQTQLSLANKSNEEAFEELKAARTKNEKAESKLRAAQTEAEELISKICSLEEEIENERTLSSENLAKCEKLKDELLRMKQETQLQQDTEILHREGVDSELMFKQEKELALAASRFSECRKTIESLGQQLKSLATLEDFLLDSENDVELTSDVTQQSPQDGGEQFKLHNSDLSSLESDSESPTSLNPSISFGKSHFSFGRFYSTKA 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01258 642 Coils Coil 104 156 - -
Tsu07g01258 642 Coils Coil 379 483 - -
Tsu07g01258 642 Coils Coil 172 218 - -
Tsu07g01258 642 MobiDBLite consensus disorder prediction 588 629 - -
Tsu07g01258 642 PANTHER FILAMENT-LIKE PLANT PROTEIN 1 640 - -
Tsu07g01258 642 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 640 - -
Tsu07g01258 642 MobiDBLite consensus disorder prediction 1 55 - -
Tsu07g01258 642 MobiDBLite consensus disorder prediction 588 631 - -
Tsu07g01258 642 Pfam Filament-like plant protein, long coiled-coil 185 263 IPR008587 -
Tsu07g01258 642 Pfam Filament-like plant protein, long coiled-coil 390 571 IPR008587 -
Tsu07g01258 642 Pfam Filament-like plant protein, long coiled-coil 79 185 IPR008587 -
Tsu07g01258 642 Coils Coil 502 525 - -
Tsu07g01258 642 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01258 Tsu-Chr7 10967007 10970895 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01258 - - gmx:100810372 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01258 07 10967007 10970895 Tsu07g01258 07 10967007 10970895 ECH
Tsu02g00607 02 5114255 5118271 Tsu07g01258 07 10967007 10970895 ECH