LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu02g00607	ATGGACCGAAGGAGTTGGTTATGGCGCAGGAAGTCGTCTGAGAAAAGTCCAGGCGAAACGGAGAGTTCAGGATCATTATCATCTCTTTCAGAAAGATTTTCTGATGATCAGGTGGCATATCCAAGCCAAGCTACTCTATCACCAGAAGTCACATCTAAGGCTGCACCAAATGAAGAAGTTAGTACacccaaaaaatataaagaagacTTTATTGACGTGAAGACTCTTACGAATGAATTAGCCGCAGCTCTGCTAGATATAAGTGCCAAAGAAGATTTGGTAAAGCAACATTCTAAAGTTGCTGAAGAAGCTGTCTCAGGTTGGGAGAAGGCTGAAAATGAAGCGTTGTCTTTAAAACAACAACTTGATGCTGCAAGGCAGAAGAACTCAGGTCTTGAAGACCGAGTTAGCCATCTTGATGGGGCACTCAAAGAGTGTATGAGGCAGCTTCGCCAAGCTAGGGAAGTGCAAGAGCAAAAGATCCATGAAGCCATTGCAAATAATTCTCATAACTCGGAATCCAAAAGATTTGAACTTGAGAGAAAAGTTGCTGAACTTGAAGCTCAACTTCAAACATCAAAAGCAGATGCTGTTGCATCTATTCGTTCCGATCTTCACAGGAGACTCGAGATTGTGGAGAAGGAGAATTTGAGTCTTCAGCTTGAGCTACAATCTCGACTTGAGGAACTAGAATTCAGGATTGCAGAGAGGGATTTGAGTTCCCAAGCAGCTGAAACAGCTAGTAAACAAAACTTGGAGAGCATAAAAAAGATTGCTAAGCTTGAAGCTGAGTGCCGTAGACTGAAAGCCATGACTCGCAAACCATTTAATGTGAATGATAACAGATCTTTGACCACATCTTCAGTTTATATCGAGTCCTTCGCAGATAGTATGTCAGATGGTGGAGAGGTGAATGAATATGAACCAAGCTGTTCCGATTCATGTTCATCTGCATTTATTTCTGAACTTGATCAATTCAAGAATAAAAAGACTACTGGAAAAAATCATATTGCGACTTCAACCGAGATCAATCTCATGGATGATTTCCTTGAGATGGAAAGGCTCGCTGCCTTGCCAGATACAGAAAGGGAAAGCCATTATGCTAATGAAGGACGAGCATCTGATCAATATATTGTTGGTCAGGGTACAATGGAAGCTGAAGTGGAAGCTATGATTCAAAAGAACACGGAGTTGAAAAAGAAGCTGGAAAGAATGGAGGCAGATAAACTTAAGGTAGAGATGTGTTTAACTGAGTGCCAAAGGCAGCTTGAGAGCTCAGAGAGTCGAATAAGGGCAGCAGAGTTGAAGGTAGAAGAGCTTCAAACTCAGTTAGCACTTgcaaacaaatcaaatcaagAAGTATATGAAGAACTAAAAGAAACCAAAACAAAGAAGGATATAGTTGAATCAAAACTCAAACATGCTCAAACTGAGGTAGAAGAACTGATTTCAAGAATCCATTCATTGGAGGAAGAGATTCAGAAGGAGCAAGCTTTGTCTGCTGAGAATTCGATCAAGAGCAAGAAGTTGGAGGACGAGCTTTCAAGAATGAAACATGAAGCTCAAGTTCAGCAAGACACCAAGACTTTGCACAAGGAAAGTGTTAATCGCGATTTGAAGTCAAAACAGGATAAAGAACTTGCATTGGCTActagcaagtttgctgaatgtCAAAAAACCATTGCATCTCTTGGAAAACAGTTAAAGTCTCTTGCAACATTGGAAGACTTTCTACTTGATTCAGAAAACAACACTATGGAGTTAACATGTGAAGTTATTACACAAAATCCTCCTCAAAAGGAAggtgaaaaattgaaagtaataaATCATAGTGATTTGAGTTTGGCTAAAAGAGATTCATTATTAAACTCATCTATTACCAATGAGAAAAGTCGTAATGGATTTGGTAAGTTGATACCAAGAAGCAAGAGTGTGAGCAGAATTCGTTGA	1950	0.3846	MDRRSWLWRRKSSEKSPGETESSGSLSSLSERFSDDQVAYPSQATLSPEVTSKAAPNEEVSTPKKYKEDFIDVKTLTNELAAALLDISAKEDLVKQHSKVAEEAVSGWEKAENEALSLKQQLDAARQKNSGLEDRVSHLDGALKECMRQLRQAREVQEQKIHEAIANNSHNSESKRFELERKVAELEAQLQTSKADAVASIRSDLHRRLEIVEKENLSLQLELQSRLEELEFRIAERDLSSQAAETASKQNLESIKKIAKLEAECRRLKAMTRKPFNVNDNRSLTTSSVYIESFADSMSDGGEVNEYEPSCSDSCSSAFISELDQFKNKKTTGKNHIATSTEINLMDDFLEMERLAALPDTERESHYANEGRASDQYIVGQGTMEAEVEAMIQKNTELKKKLERMEADKLKVEMCLTECQRQLESSESRIRAAELKVEELQTQLALANKSNQEVYEELKETKTKKDIVESKLKHAQTEVEELISRIHSLEEEIQKEQALSAENSIKSKKLEDELSRMKHEAQVQQDTKTLHKESVNRDLKSKQDKELALATSKFAECQKTIASLGKQLKSLATLEDFLLDSENNTMELTCEVITQNPPQKEGEKLKVINHSDLSLAKRDSLLNSSITNEKSRNGFGKLIPRSKSVSRIR	649

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu02g00607	649	Coils	Coil	169	196	-	-
	Tsu02g00607	649	Coils	Coil	202	222	-	-
	Tsu02g00607	649	Coils	Coil	139	167	-	-
	Tsu02g00607	649	MobiDBLite	consensus disorder prediction	18	58	-	-
	Tsu02g00607	649	Coils	Coil	416	499	-	-
	Tsu02g00607	649	PANTHER	FILAMENT-LIKE PLANT PROTEIN 4	1	640	-	-
	Tsu02g00607	649	PANTHER	FILAMENT-LIKE PLANT PROTEIN	1	640	-	-
	Tsu02g00607	649	Pfam	Filament-like plant protein, long coiled-coil	291	366	IPR008587	-
	Tsu02g00607	649	Pfam	Filament-like plant protein, long coiled-coil	189	274	IPR008587	-
	Tsu02g00607	649	Pfam	Filament-like plant protein, long coiled-coil	377	573	IPR008587	-
	Tsu02g00607	649	Pfam	Filament-like plant protein, long coiled-coil	90	197	IPR008587	-
	Tsu02g00607	649	MobiDBLite	consensus disorder prediction	1	64	-	-
	Tsu02g00607	649	MobiDBLite	consensus disorder prediction	522	542	-	-
	Tsu02g00607	649	Coils	Coil	388	408	-	-
	Tsu02g00607	649	Coils	Coil	108	135	-	-
	Tsu02g00607	649	MobiDBLite	consensus disorder prediction	1	17	-	-
	Tsu02g00607	649	Coils	Coil	244	271	-	-
	Tsu02g00607	649	Coils	Coil	507	527	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu02g00607	Tsu-Chr2	5114255	5118271	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu02g00607	-		-	gmx:100784648	834.328

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu02g00607	02	5114255	5118271	Tsu02g00607	02	5114255	5118271	ECH
	Tsu02g00607	02	5114255	5118271	Tsu07g01258	07	10967007	10970895	ECH