Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01245 ATGGCAGCTGAGTTAGTCAATGCTGCAACAAGCGAGAAATTGGCTGAAACTGATTGGgcaaaaaatattgaaatatgtGAGCTGGTTGCACGCGATAAAAGGCAAGCTAGAGATGTTGTTAAAGCTATCAAGAAGAAACTCGGCAGCAAACACCCCAATACTCAACTTTATGCTGTCACGTTGCTGGAGATGTTGATGAACAATACTGGAGAGCATATTCATGATCAAGTGATTGATGTCGGTGTTATTCCTATTCTTGTgaaaattgtgaagaaaaaGTCTGATTTGCCTGTGAGGGAGAGGATATTTCTCCTACTAGATGCTACACAATCATCCCTCGGTGGAGCCTCTGGAAAATATCCGCAGTATTATAATGCATACAATGATTTGGTGAATGCTGGAGTGCAGTTTCCTCAAAGTGCCCAAGTGGTCCAACCAAATCATGCTAGTTCACAACCTAGTAGGACCGGTACTGGTAGTGTACCAAACAGGGAGCAGGCCGCACCTAGACATGAAGCGGTTGTACCACAAGCAGAGTCCCAGACAGTTCCTGAATCTAGCATCATCCAAAAGGCTGGTAATGCATTGGAAGTTTTAAATGAAGTCCTTGATGCTGTTGATGCTCAAAATCCTCAGGGAGCAAGTGATGAATTCACCCTTGACCTTGTAGAACAATGTTCATTTGAGAAGCAAAGGGTAATGCATCTTGTGATGGCTTCTCGAGATGAGAGGATAGTTTCTCGAGCAATTGAATTGAACGAACAGCTTCAGAAAGTTCTTGCAAGACATGAAGACCTTGTTTCTGGAAGAGCTACAAAGCCTGCTAATGAACATGTTCCAAAAGTTACACCAAGACGCCATGACGTTGTATCTGGCAGAGCTACAACAACTGCTAATGAACAGTTTCCGAAAGTTCTACCAAGACACGATGACGTTGTATCTGTCAGAGCTACAACAAATACTGTGAACGAACAGTTTCCAAAAGTTCTTCCAAGACGCAATGACGTTGGATCTGGCAGAGCTACAACAACTACTATTACTCGTTTTGACCATGATGAATCAGAGGAGGAAGAGGAGCCTGAACAGTTAGTACGAAGATTACGCAAAGGGAAGGCTTGTGCAAAGCCTGAAGACGAAGAAACTGAAACGGACATCTCTCGCATGCGTTTGAATGGGGAAAGACTCAATCGTCCTTTAATACGGCCACTGTCTGTAGAGCCATCTCGAGAAGCTTACAGTCCTGCTCCTCAACCGGCTTTAATCCCACCTCCACGTCCGAAACAGAACGGGGAGCTTCCTCCCGTGGCAATTCCACCGCCACCTGCAAAACACATGGAGAGGGAGAGATTTTTTCAGGAAAACAAGGATGCTTCTAATGTGTCTGGCCACATGAGAGGTCTCTCTTTACATAGTCGTAACAGCTCTCACAGTGGAAGCTTTGATTTTAGTGACTGA 1455 0.4378 MAAELVNAATSEKLAETDWAKNIEICELVARDKRQARDVVKAIKKKLGSKHPNTQLYAVTLLEMLMNNTGEHIHDQVIDVGVIPILVKIVKKKSDLPVRERIFLLLDATQSSLGGASGKYPQYYNAYNDLVNAGVQFPQSAQVVQPNHASSQPSRTGTGSVPNREQAAPRHEAVVPQAESQTVPESSIIQKAGNALEVLNEVLDAVDAQNPQGASDEFTLDLVEQCSFEKQRVMHLVMASRDERIVSRAIELNEQLQKVLARHEDLVSGRATKPANEHVPKVTPRRHDVVSGRATTTANEQFPKVLPRHDDVVSVRATTNTVNEQFPKVLPRRNDVGSGRATTTTITRFDHDESEEEEEPEQLVRRLRKGKACAKPEDEETETDISRMRLNGERLNRPLIRPLSVEPSREAYSPAPQPALIPPPRPKQNGELPPVAIPPPPAKHMERERFFQENKDASNVSGHMRGLSLHSRNSSHSGSFDFSD 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01245 484 Coils Coil 246 266 - -
Tsu07g01245 484 MobiDBLite consensus disorder prediction 455 484 - -
Tsu07g01245 484 Pfam VHS domain 5 113 IPR002014 GO:0035091|GO:0043130
Tsu07g01245 484 Gene3D - 178 276 IPR038425 -
Tsu07g01245 484 SUPERFAMILY ENTH/VHS domain 4 139 IPR008942 -
Tsu07g01245 484 Pfam GAT domain 196 269 IPR004152 GO:0035091|GO:0043130
Tsu07g01245 484 MobiDBLite consensus disorder prediction 271 295 - -
Tsu07g01245 484 MobiDBLite consensus disorder prediction 416 441 - -
Tsu07g01245 484 SUPERFAMILY GAT-like domain 186 270 - -
Tsu07g01245 484 CDD VHS 2 130 - -
Tsu07g01245 484 MobiDBLite consensus disorder prediction 142 163 - -
Tsu07g01245 484 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Tsu07g01245 484 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 322 484 - -
Tsu07g01245 484 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 276 - -
Tsu07g01245 484 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Tsu07g01245 484 PANTHER TOM1-LIKE PROTEIN 1 276 IPR044836 GO:0035091|GO:0043130|GO:0043328
Tsu07g01245 484 PANTHER TOM1-LIKE PROTEIN 322 484 IPR044836 GO:0035091|GO:0043130|GO:0043328
Tsu07g01245 484 MobiDBLite consensus disorder prediction 405 484 - -
Tsu07g01245 484 Gene3D - 2 136 IPR008942 -
Tsu07g01245 484 MobiDBLite consensus disorder prediction 142 181 - -
Tsu07g01245 484 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01245 Tsu-Chr7 10799717 10805695 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01245 - - mtr:MTR_3g097280 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01245 07 10799717 10805695 Tsu07g01245 07 10799717 10805695 ECH
Tsu02g00583 02 4912764 4916771 Tsu07g01245 07 10799717 10805695 PCT