Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01193 ATGGAAACAGTGACCCCTGAGCCTGATCCTGGAAAATCATCACCACCATTGGATGATTCCAAAAATGAAACAATTCTTGTTCAAAATGATGGAGCATTGAATGACAGCACAGAAGCAGAACTCACCAAAATCAGTCTCATGAGAGCTCTTGTTGAAAGCCGCGACCCTTCTTCTAAGGAAGTAGATGATTTGATGCTTAGAAGATTCTTGAGAGCTCGTGATTTAGATGTAGATAAGGCTTCAACAATGTTTCTCAAGTATTTGAAATGGAAACATTCATTTGTTCCAAATGGTTCCATTTCCCCTTCAGAGATCTCTGAGGATCTTGCACAAGAAAAGATGTATGTTCAAGGAGTTGATAAAAAGGGTCGACCTATAACTGTTGCTTTTGCTgctaaacattttcaaaacaaaaatggttTGGATGCATTCAAgcGATATGTGGTTTTTGCTCTTGAGAAACTATGCTCAAGGATGCCAGCAGGGGAAGAAAAGTTTCTTGCAATTGCAGATATTAAGGGATGGGGATATGCAAATAGTGACATTCGTGGATACCTTGGTTCTCTAACCATTCTACAGGATTACCATCCAGAGAGATTAGGAAAATTGTTCATAGTCCATGCACCTTACATGTTTATGAAAGTATGGAAACTTATTTACCCTTTCATTGATGACAATACCAAGAAGAAGGTAACACTTCAAAATTGCAACTTGATGTACTCGCTctag 729 0.3704 METVTPEPDPGKSSPPLDDSKNETILVQNDGALNDSTEAELTKISLMRALVESRDPSSKEVDDLMLRRFLRARDLDVDKASTMFLKYLKWKHSFVPNGSISPSEISEDLAQEKMYVQGVDKKGRPITVAFAAKHFQNKNGLDAFKRYVVFALEKLCSRMPAGEEKFLAIADIKGWGYANSDIRGYLGSLTILQDYHPERLGKLFIVHAPYMFMKVWKLIYPFIDDNTKKKVTLQNCNLMYSL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01193 242 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 27 234 - -
Tsu07g01193 242 SUPERFAMILY CRAL/TRIO N-terminal domain 31 97 IPR036273 -
Tsu07g01193 242 SMART CRAL_TRIO_N_2 62 87 IPR011074 -
Tsu07g01193 242 SUPERFAMILY CRAL/TRIO domain 103 237 IPR036865 -
Tsu07g01193 242 Gene3D - 14 240 IPR036865 -
Tsu07g01193 242 CDD SEC14 115 238 IPR001251 -
Tsu07g01193 242 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 102 242 IPR001251 -
Tsu07g01193 242 PANTHER OS03G0850700 PROTEIN 27 234 - -
Tsu07g01193 242 MobiDBLite consensus disorder prediction 1 23 - -
Tsu07g01193 242 Pfam CRAL/TRIO domain 112 233 IPR001251 -
Tsu07g01193 242 SMART sec14_4 108 237 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01193 Tsu-Chr7 10225454 10228128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01193 66 236 Acyl Lipid Metabolism Gene Families AT5G47730 26.064 4.91e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01193 - - gmx:100797666 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00556 02 4705322 4710177 Tsu07g01193 07 10225454 10228128 ECH
Tsu07g01193 07 10225454 10228128 Tsu07g01193 07 10225454 10228128 ECH
Tsu02g00556 02 4705322 4710177 Tsu07g01193 07 10225454 10228128 PCT