Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01168 ATGGAAGAGATTCCGGTACCGGAGGTGCAAATAAACGGTGTAGCAACAACTGCAACACTAAACCCCTCTGAACCTCACGGATCGAAGCGTCAACGCAGACCAAGCGTCAGATTAGGCGACATCGGAGACCAACCTTCAGATTCCCACCCTCGTCGCACCACAAAACCATGGCGATTCGGAATCAGCAACAACATCTCAGGTAAACCCTCAAAGACTCGTCCTCTAACTAATTTGACTTCCGTTTCCGATTTCGACGAAACACAAGAAGGCGGCGAAGAAGAAAACATAGAAGCTAACACCGACGGTGTAATAATTGGTAGCTGGAAAGTTAAAAAAGGTTCGAAAAGACCTCGATCGAATTGGATTTCTTCGCGAATCGATAAAGGCGAAGAAACtgttgataatgataatgataatgatgatgtttatgaagattttgaaggtgataattcaggtagatcaattCATTCTTCAGGGAATTTGGGGGATTTTGATGTTAGGGATAGAAATGAAGATGGTGGAAGAGGTAGTTGTGGTGAAGATGGTGTTAAAATTTGGCTTAATGGATTAGGTTTAGGTAGATATGCACCTGTTTTTCAAATTCATGAAGTTGATGATGAAGTTTTACCTTTGTTAACACTTGAGGATCTTAAAGATATGGGTGTTAATGCTGTTGGTTCTAGAAGGAAATTGTATTGTGCTATTCAGAAGCTTGGGAAGGGATTCTCCTAA 732 0.3866 MEEIPVPEVQINGVATTATLNPSEPHGSKRQRRPSVRLGDIGDQPSDSHPRRTTKPWRFGISNNISGKPSKTRPLTNLTSVSDFDETQEGGEEENIEANTDGVIIGSWKVKKGSKRPRSNWISSRIDKGEETVDNDNDNDDVYEDFEGDNSGRSIHSSGNLGDFDVRDRNEDGGRGSCGEDGVKIWLNGLGLGRYAPVFQIHEVDDEVLPLLTLEDLKDMGVNAVGSRRKLYCAIQKLGKGFS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01168 243 PANTHER SCP160 165 243 - -
Tsu07g01168 243 PANTHER SCP160 16 152 - -
Tsu07g01168 243 SUPERFAMILY SAM/Pointed domain 180 238 IPR013761 -
Tsu07g01168 243 ProSiteProfiles SAM domain profile. 181 241 IPR001660 GO:0005515
Tsu07g01168 243 Pfam SAM domain (Sterile alpha motif) 183 238 IPR001660 GO:0005515
Tsu07g01168 243 MobiDBLite consensus disorder prediction 1 100 - -
Tsu07g01168 243 PANTHER PROTEIN BICAUDAL C HOMOLOG 1-A-LIKE 165 243 - -
Tsu07g01168 243 PANTHER PROTEIN BICAUDAL C HOMOLOG 1-A-LIKE 16 152 - -
Tsu07g01168 243 CDD SAM_superfamily 183 237 - -
Tsu07g01168 243 Gene3D - 178 238 IPR013761 -
Tsu07g01168 243 MobiDBLite consensus disorder prediction 57 85 - -
Tsu07g01168 243 SMART SAM_4 175 241 IPR001660 GO:0005515
Tsu07g01168 243 MobiDBLite consensus disorder prediction 130 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01168 Tsu-Chr7 9979304 9980633 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01168 - - mtr:MTR_3g498865 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00533 02 4503746 4505252 Tsu07g01168 07 9979304 9980633 ECH
Tsu07g01168 07 9979304 9980633 Tsu07g01168 07 9979304 9980633 ECH