Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00533 ATGGCGGAGATTCAGCCGGCGGAGGGGCAGATAAACGGTGGCGGAACCCTAATTTTGAACTCTACCGAACCAATTGGAACCAAGCGCCAGAGAAGACCAAGTGTTCGATTGGGCGACATCGGCGTCGACCCACCTTACGATTCTCACGCCCGACGCAATAACAAGACTTGGAAACTCGCCTTCGATCACCAACGCAAAGAAAAAGATTCAGGTAAACATTCAAAGACTCGACCTTTAACTAATTTGAGTACTATTGCTGATTTCAACGAAACCCTAGATGGTGATGTAAGAGAAGGGAATGTTGATACTACTGTTGCAATTGGTAGCTGGAAGGTTAAGGAATCTAAGAAAAGAGGTTCTGTTGCCACTAAGAGAGTTAGATCGAATTGGGTTTCAAGAATCGATGAAACTGGTGGTGGCGGTGTTGGTGGCGCCGGTGTTGTTGAATTAGAGGAAAAGTATAGTGGTGCTGAAGATATCGATGATGGGTATAGAGAATTCGATGTGGAAAATTCGGAAAGTCCTTTGAAAGAACAAAGTCCTATTCATTCAATGGAGAATTTAGGGATTGATGGGCATAGAAGGTCTTTTAAGGGTAGAGATCATCATGATGGAATTGAGTTATCTGGGCCGTCTGAAAATGATGTTAGAAATGAGAATGGTGGGAGGATTAGGTGTGGTGAAGATGGGATTAGGATTTGGCTTAATGGATTGGGATTAGGTCGTTATGCGCCGGTGTTTGAAGTGCATGAGGTTGATGATGAAGTTTTGCCAATGTTGACATTAGAAGATCTCAAAGATATGGGAATTAATGCTGTTGGATCCAGAAGAAAATTGTATTGTGCTATTCAGAAGCTTGGTAAGGGCTTCTCCTGA 876 0.4326 MAEIQPAEGQINGGGTLILNSTEPIGTKRQRRPSVRLGDIGVDPPYDSHARRNNKTWKLAFDHQRKEKDSGKHSKTRPLTNLSTIADFNETLDGDVREGNVDTTVAIGSWKVKESKKRGSVATKRVRSNWVSRIDETGGGGVGGAGVVELEEKYSGAEDIDDGYREFDVENSESPLKEQSPIHSMENLGIDGHRRSFKGRDHHDGIELSGPSENDVRNENGGRIRCGEDGIRIWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGINAVGSRRKLYCAIQKLGKGFS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00533 291 SMART SAM_4 223 289 IPR001660 GO:0005515
Tsu02g00533 291 SUPERFAMILY SAM/Pointed domain 229 286 IPR013761 -
Tsu02g00533 291 MobiDBLite consensus disorder prediction 1 57 - -
Tsu02g00533 291 PANTHER SCP160 25 291 - -
Tsu02g00533 291 CDD SAM_superfamily 234 285 - -
Tsu02g00533 291 Gene3D - 226 286 IPR013761 -
Tsu02g00533 291 Pfam SAM domain (Sterile alpha motif) 233 286 IPR001660 GO:0005515
Tsu02g00533 291 ProSiteProfiles SAM domain profile. 234 289 IPR001660 GO:0005515
Tsu02g00533 291 PANTHER - 25 291 - -
Tsu02g00533 291 MobiDBLite consensus disorder prediction 14 28 - -
Tsu02g00533 291 MobiDBLite consensus disorder prediction 62 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00533 Tsu-Chr2 4503746 4505252 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00533 - - aprc:113856178 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00533 02 4503746 4505252 Tsu07g01168 07 9979304 9980633 ECH
Tsu02g00533 02 4503746 4505252 Tsu02g00533 02 4503746 4505252 ECH