Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01156 ATGGTCTTCCTCGCTCCATTGCCAACATTTTATCAAATCTACAAGAAAAAATCTACAGAAGGTTTTCAGTCAGTTCCTTATGTTGTTGCATTGCTAAGTGCAATGCTTTGGATATATTATGCACTTGTCAAAAATGAAGATAGCATCTTTCTCCTCACAATTAATTCATTTGGACTTGTGGTAGAATCCATTTACCTTGCAATCTTCCTAGTCTATGCCTCAAATAAAGCCAGGCTTTCGACCATCAAGCTTATTCTCTTGTTAAATGTGTTTGGATTTGGAGCAATGCTTGTTTCATCCCTCTGCTTAACAACAGGACCCAAACGTCTTTCAATTATAGGATGGATTTGTCTCGTTTTCAACATAAGCGTATTTGCTTCTCCTCTCTGCATTATTGTGAGAATTTAA 408 0.3676 MVFLAPLPTFYQIYKKKSTEGFQSVPYVVALLSAMLWIYYALVKNEDSIFLLTINSFGLVVESIYLAIFLVYASNKARLSTIKLILLLNVFGFGAMLVSSLCLTTGPKRLSIIGWICLVFNISVFASPLCIIVRI 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01156 135 PANTHER RAG1-ACTIVATING PROTEIN 1 1 134 - -
Tsu07g01156 135 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 1 134 - -
Tsu07g01156 135 Gene3D - 1 78 - -
Tsu07g01156 135 Pfam Sugar efflux transporter for intercellular exchange 1 76 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01156 Tsu-Chr7 9865482 9866444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01156 1 135 Miscellaneous Gene Families AT5G13170 52.941 5.02e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01156 K15382 - gmx:100790580 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01156 07 9865482 9866444 Tsu07g01156 07 9865482 9866444 ECH
Tsu02g00527 02 4446193 4448838 Tsu07g01156 07 9865482 9866444 PCT