Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g00527 ATGGCCATGTCCCGTGAATCTTGGGCTTTTGTCTTTGGCATAATAGgCAACATCATTTCCTTTGCTGTGTTCCTCTCACCATTgcCAACATTTTACACAATCTTTAAGAAGAAATCTGCTGATGGGTATCAATCACTTCCTTATGTTGTTGCACTTTTCAGTGCAATGCTTTGGATTTACTATGCATTTGTCAAGAGAGAAGCTGCTCTTCTTCTCATCACCATTAACACTTTTGGAATTATTGTTGAATCTGCTTACCTCATAGTCTTCCTAATTTATGCCTCAAAGAAATCTAGGCTTTCAACCATAAAACTACTTCTCTTGCTGAATGTGTTTGGATTTGGAGCCATGCTTCTATCAACTCTATACCTCTCAAAGGGAGCAAAACGTCTTGCAATCATAGGATGGATTTGCCTTGTTTTCAACATTAGTGTATTTGCTGCACCACTATTTGTCCTTAGCAAAGTCATAAGAACAAGGAGTGTTGAATACATGCCATTTTTCTTGTCCTTGTCCTTAACCATCAATGCTGTTATGTGGTTCTTCTATGGCCTTCTCCTCAGGGATTATTATGTTGCTCTACCAAATACACTTGGATTTGTGTTCGGAATAATTCAGATGGTAGTGTATTTGATATATAGAAATGCAACACCAGTGATAGAGGCACCAGTTAAGGGTCAAGAATTGAGTGGTGGCCATATAGTTGATGTTGTGAAGATTGGAAATGACCCTAATCGTGGTGGAGGTGCAGTTAGCAAAGTGTGA 765 0.3869 MAMSRESWAFVFGIIGNIISFAVFLSPLPTFYTIFKKKSADGYQSLPYVVALFSAMLWIYYAFVKREAALLLITINTFGIIVESAYLIVFLIYASKKSRLSTIKLLLLLNVFGFGAMLLSTLYLSKGAKRLAIIGWICLVFNISVFAAPLFVLSKVIRTRSVEYMPFFLSLSLTINAVMWFFYGLLLRDYYVALPNTLGFVFGIIQMVVYLIYRNATPVIEAPVKGQELSGGHIVDVVKIGNDPNRGGGAVSKV 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g00527 254 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 242 - -
Tsu02g00527 254 PANTHER RAG1-ACTIVATING PROTEIN 1 4 242 - -
Tsu02g00527 254 Gene3D - 129 221 - -
Tsu02g00527 254 Gene3D - 10 99 - -
Tsu02g00527 254 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Tsu02g00527 254 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g00527 Tsu-Chr2 4446193 4448838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g00527 1 240 Miscellaneous Gene Families AT5G50800 56.017 4.27e-93 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g00527 K15382 - gmx:100805676 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00527 02 4446193 4448838 Tsu02g00527 02 4446193 4448838 ECH
Tsu02g00527 02 4446193 4448838 Tsu07g01156 07 9865482 9866444 PCT