Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01141 ATGGAATTGGACAGGGGATTAACGGGAGAGCGGACAGTGAAATCATTGCGTCTTTCAAAGGCCTTGACAGTACCTGAAACGACAACTGTATATGAAGCTTGTCGACGGATGGCTGCCCGTAGGGTGGATGCGCTGTTACTAACTGATTCTAATGGTTTGCTTTGTGGAATCCTCACAGACAAGGATATAGCAAGAAAAGTTGTTGCCCAAGAGATTAATCCTGAAGATACACCTGCTTCCAAGGTTATGACAAGAAATCCGGTATTTGTCCTTTCCGAAACTCTTGCTGTGGAAGCCCTCCAGAAGATGGTGCAAGGGAAATTTAGGCATCTACCTGTGGTGGAGAATGGGGAAGTTTTGGCTTTACTTGACATAGCAAAGTGTTTGCATGATGCCACTGCACGTATGGAAAGAGCTGCAGAGAAAGGAAAAGCAATTGCAGCAGCTGTTGAAGGGGTTGAAAAACATTGGGGATCATCTAATTCTGACTCTAATTCATCATTTATTGAGGCCCTTCGGGAAAAGATATTCAAACCATCACTGTCCACAATCATTCCTGAGAATTCAAAGATGGTGACAGTTTCACCAACAGAATCGGTTctgaaaacaacaaaaatgatgGTTGAACTTCATGCGAGTTGTGCTGTTGTGACTGTTGATGGCAAAGCTCGAGGCATCGTTACTTCGAAGGATATCTTGATGCGGGTAATTGCACAAAATCTTCCGCCTGCATCAACTCCTGTTGAGAAGATCATGACTCCAAATCCAGAATGTGCAGTAATTGATACACCAATTGTCGATGCGCTTCATAGTATGCATGATGGAAAATTTTTACACCTTCCAGTGGTTGATAGAGATGGCATTGTAGTTGCTGTGGTCGATGTGATTCATGTGACTCATGCTGCTGTGGCTACTGTTAGTCAGGTCGGAAACAATGAAGCTTCTAACTCCTTGATGCAAAGATTTTGGGATTCAGCCATGGCCTTACCTCCAATTGACGATGATGACGAAACACGAAGTGAGGCTTCCTTCAAAATAGGTTCTGATGGAGGAGAAACAGGGAGATCCATTCCTTTTACTTCTGCAAGCATGCCCAATACATTTTCCTTCAAAGTACAAGATAAGAAGGGCAGAATGCATAGATTCACATGTGATACCCGGAACATGACGGAGGTTATAACTTCAATCATTCAAAGAGTTGGTACTGAAATTGACCCTGACAATCTGCCTCAAATTCTGTATGAAGATGAAGATCACGATAAAGTTGTATTGGCTTCAGATAGTGATCTTGCCGCAGCTGTGGACCATGCAAGGACTGCTGGTTTGAAGGGATTGAAATTGTATTTAGACTACGAGGGAACACAAGGTCGCAGGAAAGGTTCACGTTCGGGAAGTTTAGACTATGCGTATTCAGATGCATGGGCCTCAGCATACAGTGGTGTTGCTGCCGGAGCTGCTCTTGTTGCTGGATTAGGCCTATTAACATACTTTAAACGAGTTTGA 1503 0.4311 MELDRGLTGERTVKSLRLSKALTVPETTTVYEACRRMAARRVDALLLTDSNGLLCGILTDKDIARKVVAQEINPEDTPASKVMTRNPVFVLSETLAVEALQKMVQGKFRHLPVVENGEVLALLDIAKCLHDATARMERAAEKGKAIAAAVEGVEKHWGSSNSDSNSSFIEALREKIFKPSLSTIIPENSKMVTVSPTESVLKTTKMMVELHASCAVVTVDGKARGIVTSKDILMRVIAQNLPPASTPVEKIMTPNPECAVIDTPIVDALHSMHDGKFLHLPVVDRDGIVVAVVDVIHVTHAAVATVSQVGNNEASNSLMQRFWDSAMALPPIDDDDETRSEASFKIGSDGGETGRSIPFTSASMPNTFSFKVQDKKGRMHRFTCDTRNMTEVITSIIQRVGTEIDPDNLPQILYEDEDHDKVVLASDSDLAAAVDHARTAGLKGLKLYLDYEGTQGRRKGSRSGSLDYAYSDAWASAYSGVAAGAALVAGLGLLTYFKRV 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01141 500 Coils Coil 498 500 - -
Tsu07g01141 500 Pfam PB1 domain 367 450 IPR000270 GO:0005515
Tsu07g01141 500 CDD PB1_MUG70 368 451 - -
Tsu07g01141 500 ProSiteProfiles CBS domain profile. 252 313 IPR000644 -
Tsu07g01141 500 ProSiteProfiles PB1 domain profile. 365 452 IPR000270 GO:0005515
Tsu07g01141 500 Pfam CBS domain 80 122 IPR000644 -
Tsu07g01141 500 Pfam CBS domain 19 67 IPR000644 -
Tsu07g01141 500 Pfam CBS domain 248 298 IPR000644 -
Tsu07g01141 500 Pfam CBS domain 189 234 IPR000644 -
Tsu07g01141 500 Gene3D - 6 148 IPR046342 -
Tsu07g01141 500 Gene3D - 159 314 IPR046342 -
Tsu07g01141 500 SMART PB1_new 367 452 IPR000270 GO:0005515
Tsu07g01141 500 SMART cbs_1 20 68 IPR000644 -
Tsu07g01141 500 SMART cbs_1 255 303 IPR000644 -
Tsu07g01141 500 SMART cbs_1 86 130 IPR000644 -
Tsu07g01141 500 SMART cbs_1 190 237 IPR000644 -
Tsu07g01141 500 CDD CBS_pair_MUG70_1 18 132 - -
Tsu07g01141 500 ProSiteProfiles CBS domain profile. 83 141 IPR000644 -
Tsu07g01141 500 ProSiteProfiles CBS domain profile. 184 243 IPR000644 -
Tsu07g01141 500 SUPERFAMILY CBS-domain pair 189 302 IPR046342 -
Tsu07g01141 500 ProSiteProfiles CBS domain profile. 17 75 IPR000644 -
Tsu07g01141 500 PANTHER CBS/OCTICOSAPEPTIDE/PHOX/BEMP1 (PB1) DOMAIN PROTEIN 6 488 - -
Tsu07g01141 500 Gene3D - 366 449 - -
Tsu07g01141 500 SUPERFAMILY CAD & PB1 domains 361 455 - -
Tsu07g01141 500 SUPERFAMILY CBS-domain pair 10 127 IPR046342 -
Tsu07g01141 500 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 6 488 - -
Tsu07g01141 500 MobiDBLite consensus disorder prediction 335 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01141 Tsu-Chr7 9697579 9704047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01141 - - gmx:100785816 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01141 07 9697579 9704047 Tsu07g01141 07 9697579 9704047 ECH
Tsu07g01141 07 9697579 9704047 Tsu02g00502 02 4202799 4209616 PCT