Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu02g00502 | ATGTCTAGTCTCGGTGGTTCTTCCCGAAAGAGTGGTTCGTTTATGAGTAGCCCTACGCGGTCACAGAAGAAAGCCTCTGATTATTCATCACTTGACGCCACTTTTCGTAAACCATTTCATCCTATGCGCACCACCACGGGAGAGCGAACTGTGAAAACATTGCGACTTTCAAAGGCATTGACAGTGCCTGAAACAACAACTGTCTATGAAGCTTGTCGTCGGATGGCTGTTCGCAGAGTAGATGCTCTATTATTAACTGATTCTAATGCTTTGCTCTGTGGAATCCTCACAGACAAGGATATAACAACAAGAGTTATTGCCCGTGAGGTTAATCTTGAAGACACACCTTGTTCCATGGTTATGACAAGGAATCCAGTATTTGTCCTTACCGACACTCTTGCTGTCGAAGCGCTCCAAAAGATGGTGCAAGGGAGATTCAGACATTTACCTGTGGTGGAGAACGGAGAAGTGGTTGCTATCCTTGACATAGCTAAGTGTTTATATGATGCCATTGCCCGTATGGAAAGGGCCGCAGAGAAAGGAAAGGCAATTGCAGCAGCTGTTGAAGGCTCCAATTCATCATTCATTGATACTGTTCGGGAGCAGATATTTAAGCCATCATTGTCTACAATCATTCCTGAGAATTCAAAGGTTGTTACAGTTTCATCAACAGATTCAGTTCTGTCAACAACGAAAAAGATGCTTGAACTTCGTGCAAGTGCTGCCGTTGTAACAGTTGATAACAAACCTTGCGGTATCCTTACTTCAAAGGATATCTTGATGCGAGTAATAGCACAAAATCTCTCCCCAGCGTCAACTCTTGTTGAGACGGTCATGACTGCAAATCCAGAATGTGCAATAATTGATACACCAATTGTTGATGCACTTCACATAATGCATAATGGAAAATTTTTGCATCTTCCCGTGGTTGATAGAGATGGCATCGTTGTTGCTACGGTTGATGTGATTAATATTACTCATGCTGCTGTGGCTACAGCTAGTCAGGCTGGGAATACTGCCAATATGAACAATGAAGCTGCCAACTCCATGATACAAAAGTTTTGGGATTCGGCGATGGCTTTCACTCCAAATGACGAGGAAGAAGATTCACAAAGTGAAAATTCCTTGAAATTGATTTCCGAGGGAGGAGAAACAGCGAGATCCCTTCCGTATAATGGATCAAGCATGCAGACCACATTTTCCTTCAAATTACAAGATAAGAAGGGTAGACTGCATAGATTCACATGCGATACTCGGAGCTTGACAGAAGTTATAACTTGCATCATTCAGAGAGTAGGCGATGACATTGACCCGAAGAACCTGCCCCAAATTTTGTATGAAGATGAAGATCATGATAAAGTTGTATTGGCTTCAGATAGTGATCTCGCGGCAGCCGTGGACCATGCAAAGATGGCCGGTTTGAAGGGATTGAGATTGCACTTAGATTACTCAGGAACACGTGGTTATGGAACAGAATCAAGTTTAAATTCGGAATATGCTAATTCAGAAGCATGGGCCTCGGCCTATCATGCCGTTGCAGCTGGAGCTGCAGTTGTTGCTGCCTTAGGCCTATTAGCGTTATTCAAGAGAAGAcaatga | 1599 | 0.4321 | MSSLGGSSRKSGSFMSSPTRSQKKASDYSSLDATFRKPFHPMRTTTGERTVKTLRLSKALTVPETTTVYEACRRMAVRRVDALLLTDSNALLCGILTDKDITTRVIAREVNLEDTPCSMVMTRNPVFVLTDTLAVEALQKMVQGRFRHLPVVENGEVVAILDIAKCLYDAIARMERAAEKGKAIAAAVEGSNSSFIDTVREQIFKPSLSTIIPENSKVVTVSSTDSVLSTTKKMLELRASAAVVTVDNKPCGILTSKDILMRVIAQNLSPASTLVETVMTANPECAIIDTPIVDALHIMHNGKFLHLPVVDRDGIVVATVDVINITHAAVATASQAGNTANMNNEAANSMIQKFWDSAMAFTPNDEEEDSQSENSLKLISEGGETARSLPYNGSSMQTTFSFKLQDKKGRLHRFTCDTRSLTEVITCIIQRVGDDIDPKNLPQILYEDEDHDKVVLASDSDLAAAVDHAKMAGLKGLRLHLDYSGTRGYGTESSLNSEYANSEAWASAYHAVAAGAAVVAALGLLALFKRRQ | 532 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu02g00502 | 532 | ProSiteProfiles | CBS domain profile. | 279 | 337 | IPR000644 | - | |
| Tsu02g00502 | 532 | CDD | CBS_pair_MUG70_2 | 215 | 331 | - | - | |
| Tsu02g00502 | 532 | Gene3D | - | 204 | 349 | IPR046342 | - | |
| Tsu02g00502 | 532 | ProSiteProfiles | CBS domain profile. | 55 | 115 | IPR000644 | - | |
| Tsu02g00502 | 532 | ProSiteProfiles | CBS domain profile. | 121 | 179 | IPR000644 | - | |
| Tsu02g00502 | 532 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 28 | 520 | - | - | |
| Tsu02g00502 | 532 | Gene3D | - | 33 | 186 | IPR046342 | - | |
| Tsu02g00502 | 532 | PANTHER | CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED | 28 | 520 | IPR034896 | - | |
| Tsu02g00502 | 532 | Pfam | PB1 domain | 399 | 482 | IPR000270 | GO:0005515 | |
| Tsu02g00502 | 532 | ProSiteProfiles | PB1 domain profile. | 397 | 484 | IPR000270 | GO:0005515 | |
| Tsu02g00502 | 532 | ProSiteProfiles | CBS domain profile. | 211 | 272 | IPR000644 | - | |
| Tsu02g00502 | 532 | SUPERFAMILY | CAD & PB1 domains | 391 | 481 | - | - | |
| Tsu02g00502 | 532 | SUPERFAMILY | CBS-domain pair | 216 | 329 | IPR046342 | - | |
| Tsu02g00502 | 532 | SMART | cbs_1 | 124 | 168 | IPR000644 | - | |
| Tsu02g00502 | 532 | SMART | cbs_1 | 217 | 264 | IPR000644 | - | |
| Tsu02g00502 | 532 | SMART | cbs_1 | 282 | 330 | IPR000644 | - | |
| Tsu02g00502 | 532 | SMART | cbs_1 | 58 | 106 | IPR000644 | - | |
| Tsu02g00502 | 532 | CDD | CBS_pair_MUG70_1 | 56 | 172 | - | - | |
| Tsu02g00502 | 532 | SUPERFAMILY | CBS-domain pair | 48 | 164 | IPR046342 | - | |
| Tsu02g00502 | 532 | SMART | PB1_new | 399 | 484 | IPR000270 | GO:0005515 | |
| Tsu02g00502 | 532 | Pfam | CBS domain | 58 | 102 | IPR000644 | - | |
| Tsu02g00502 | 532 | Pfam | CBS domain | 120 | 161 | IPR000644 | - | |
| Tsu02g00502 | 532 | Pfam | CBS domain | 215 | 261 | IPR000644 | - | |
| Tsu02g00502 | 532 | Pfam | CBS domain | 275 | 320 | IPR000644 | - | |
| Tsu02g00502 | 532 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Tsu02g00502 | 532 | CDD | PB1_MUG70 | 400 | 484 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu02g00502 | Tsu-Chr2 | 4202799 | 4209616 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu02g00502 | - | - | gmx:100783514 | 767.303 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu02g00502 | 02 | 4202799 | 4209616 | Tsu02g00502 | 02 | 4202799 | 4209616 | ECH | |
| Tsu07g01141 | 07 | 9697579 | 9704047 | Tsu02g00502 | 02 | 4202799 | 4209616 | PCT |