Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01108 ATGAGCACTCCTAGAGTACGAGGTTCAGggAGAAAAATAAGTATAAACTTATTAGGTGAATTCAGTGGAAGtgcatcattattattatcaccaAAAGGCTTAATGCAGAAACGAAGAAAAGTTCCATTGATCATTTTACTAAGGAGATTCCTTGGTGCAACCGTTTTTTCAATAGCTATAACTTGTTTCTTCTTTGTTCATGTTCATGTTTCCACCACTTCTCCAACTCATCATAATAATTTCAATGAAAAGATTCATACGTCTCGTGACCTGCAAAGCTGGACCCGAGAGCTCGCTCCGCCCCATTTATCTAAGGCTCCATCCTCTACTTCTAAGTTAAATGATTCAAAAGAGGATCCAGATTATGAGAAACTGTGGAAGCCACCACCAAATCATGGTTTTCTACCCTGCACAAAGCCTACCCCTAATTACACAACTCCTGAGAATACGCGAGGTTACCTCCTCGTTCATACGAATGGTGGACTCAACCAAATGCGAACCGGGATATGTGATATGGTAGCTATAGCTCGCATGATAAACGCCACTCTTGTAATTCCAGAACTTGATAAGAAGTCATTTTGGCACGATAACAGTGATTTCTCTGATATCTTCGATGAAAAGAGGTTTATTAGTTCTCTTGCCGATGATATAAAAATCATTAAGAAACTTCCTAAGGATCTGGCTAATGAAACCAAAATGGTGAGGCAATTCAAAAGCTGGTCTGGTATGGATTACTATCAGAATGAGATTGCCACCCTTTGGGATTATTTCAAAGTTATTAAAGCTTCCAAATCCGATTCTCGATTAGCAAATAATAATCTACCACCGGATATTCAAAAACTTCGCTGCCGCACTTGTTATGAAGCTCTTCGTTTCTCTCCCCGCATTGAACAAATGGGAAAAATATTGGTGGAGAGAATGAGATCATTTGGTCCTTATATAGCACTACACTTACGTTACGAGAAGGATATGCTTGCATTTAGCGGATGTATACACGGTTTATCTACTTCTGAGGCCGAAGAACTACGGATTATCAGAGAGAGTACTAgttattggaaaagaaagcaCATTGATCCAAATGAAGAGAGGTCTAAAGGGTTTTGTCCCTTAACTCCAAAGGAAGTTGGAATTTTCCTTAGTGCTCTTGGATACCCTAGAAAGACTCCAATATATATTGCTGCAGGGGAGATATATGGAGGCGAGTCGCATATGACTGAATTGCTATCGCGATATCCATTTTTAATGAGCAAGGAAAAGTTGGCATCCATTGCGGAGCTTGAACCATTTTCTAATCATGCGACTCAAATGGCTGCTCTTGACTATATTGTATCGGTTGAAAGTGATGTATTTGTACATTCTTACCCCGGAAACATGGCTCGAGCTGTTGAAGGCCATCGTCGTTTTCTTGGGAGAGGAAGAACCATATCTCCAGATAGGCAAGTCTCTCTTTCTCATAAGAAAGCACTCGTTCGTTTGTTTGATAAACTGGCAATTGGATCAATGGTTGAGGGAAAAAAGCTGTCCAATATAGTGAATGATCTCCACAAAGGAAGGGTTGGCTTATTAAGGAAAAGAAAAGGGCACATTCCTGGAACAAAGGGTGTAGACAGGTTTCGGTCAGAAGAAACATTTTATGCAAATCCTTTACCTGATTGTCTATGTCGGACAGAATCACCACCTACTCATCATGTTAAGCAAAAGCTTTTTCCTTCATAA 1716 0.391 MSTPRVRGSGRKISINLLGEFSGSASLLLSPKGLMQKRRKVPLIILLRRFLGATVFSIAITCFFFVHVHVSTTSPTHHNNFNEKIHTSRDLQSWTRELAPPHLSKAPSSTSKLNDSKEDPDYEKLWKPPPNHGFLPCTKPTPNYTTPENTRGYLLVHTNGGLNQMRTGICDMVAIARMINATLVIPELDKKSFWHDNSDFSDIFDEKRFISSLADDIKIIKKLPKDLANETKMVRQFKSWSGMDYYQNEIATLWDYFKVIKASKSDSRLANNNLPPDIQKLRCRTCYEALRFSPRIEQMGKILVERMRSFGPYIALHLRYEKDMLAFSGCIHGLSTSEAEELRIIRESTSYWKRKHIDPNEERSKGFCPLTPKEVGIFLSALGYPRKTPIYIAAGEIYGGESHMTELLSRYPFLMSKEKLASIAELEPFSNHATQMAALDYIVSVESDVFVHSYPGNMARAVEGHRRFLGRGRTISPDRQVSLSHKKALVRLFDKLAIGSMVEGKKLSNIVNDLHKGRVGLLRKRKGHIPGTKGVDRFRSEETFYANPLPDCLCRTESPPTHHVKQKLFPS 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01108 571 PIRSF UCP009360 23 558 IPR024709 -
Tsu07g01108 571 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 32 561 - -
Tsu07g01108 571 PANTHER OS02G0726500 PROTEIN-RELATED 32 561 - -
Tsu07g01108 571 Pfam GDP-fucose protein O-fucosyltransferase 153 468 IPR019378 -
Tsu07g01108 571 MobiDBLite consensus disorder prediction 101 122 - -
Tsu07g01108 571 CDD O-FucT_plant 153 474 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01108 Tsu-Chr7 9450360 9453916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01108 97 557 Miscellaneous Gene Families AT1G22460 66.594 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01108 - - gmx:100807411 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01108 07 9450360 9453916 Tsu07g01108 07 9450360 9453916 ECH
Tsu05g02482 05 33623830 33629746 Tsu07g01108 07 9450360 9453916 PCT