Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02482 ATGCAGAAACGGAAGTTCATTTCTTTGGTTTTGTTGAGGAAGTTGTTAACTGCAGCTATATTCTCAATTGCTTTTGTGGCTCTATTCTCTTTTCATCACATTGTTCCTTCTTCTAAGGATCATAAGTTCAATGACAAGTTCCCCACgACTCAGAATCTGCAAAGCTGGACTCAAGAGCTAGCTCCACCCCATTTATCGAAAACACTACTTCATACTTCCAAGTTGAATGGTTCAAGAAGGGATTCAGATTATGAAAAGCTGTGGAAGCCTCCATCAAATCGTGGGTTTCTTCCATGCACAAAGCCTACTCCTAATTACACTGCTCCTGTTGAGTCACGAGGATATCTTTTAGTTCATACAAATGGTGGGCTCAACCAAATGCGTTCTGGGATATGTGATATGGTAGCTGTAGCCCGTATCCTAAATGCTACTCTTGTTATTCCGGAACTTGATAAAAGATCATATTGGCAAGATACAAGCAATTTCTCTGATGTTTTTGATGAAGAGCATTTTATTGATTCACTAGCTAATGATGTAAAAATCATTAAGAACCTTCCCAATGAACTGGTTAATGAAACCAGAATGGTCAAGCAATTTATAAGCTGGTCTGGCATGGATTACTATGAGAATGAGATTGCTAGCTTGTGGGAAGAATACCAAgtTATTCGTGCTTACAAATCCGATTCGCGGTTGGCAAACAACAATCTACCTCCAGACATTCAGAAACTTCGCTGCCGAGCTTGTTATGAAGCTCTACGTTTCTCTCCTCACATTGAACAAATAGGCAAATTGTTAGTGGAGAGAATGAGGTCATTGGGTCCTTATATTGCCTTGCATTTACGTTATGAGAAGGATATGCTTGCATTTAGTGGGTGCACGCACGATTTATCTCTAGATGAAGCTGAAGAGCTACGGATGATCAGAGAGAACACTTCATATTGGAAAGTAAAGGATATTGATCCCGTAGAACAGAGGTCCAGAGGGTTTTGCCCCTTAACTCCAAAGGAAGTTGGAATTTTTCTTACTGCTCTTGGATATCCCTCAAATACACCGATATATATTGCTGCTGGAGAGATATATGGGGGTGAGTCCCATATGGCTGAACTGCGATCACGTTATCCGTTGTTAATGAGCAAGGAAAAGTTGGCATCTGTTGAGGAGCTTGAGCCCTTTTTGAATCATGCTTCTCAAATGGCTGCTCTTGACTATATTGTATCTATCGAGAGTGATGTATTTATACCCTCTTATTCTGGAAACATGGCAAGAGCAGTCGAAGGTCATCGCCGTTTTCTTGGGCGTGGAAGATCAGTATCTCCAGATAGGAAAGCCCTTGTTCGTCTCTTTGATAAACTGGATCAGGGAACAATGACTGAGGGGAAAAAACTGTCATATAGGATTATTGATCTCCACAGAAGACGACTTGGCTCCCCCAGAAAGAGAAAAGGGCCAATTTCTGGCACAAAGGGCATGGACAGGTTTCGCTCTGAAGAAACCTTTTATGCTAATCCCTTACCTGATTGTTTATGCCGGACAGAACCACCACTGCATAACGTCTCTCACATCGCCAAATAA 1572 0.4141 MQKRKFISLVLLRKLLTAAIFSIAFVALFSFHHIVPSSKDHKFNDKFPTTQNLQSWTQELAPPHLSKTLLHTSKLNGSRRDSDYEKLWKPPSNRGFLPCTKPTPNYTAPVESRGYLLVHTNGGLNQMRSGICDMVAVARILNATLVIPELDKRSYWQDTSNFSDVFDEEHFIDSLANDVKIIKNLPNELVNETRMVKQFISWSGMDYYENEIASLWEEYQVIRAYKSDSRLANNNLPPDIQKLRCRACYEALRFSPHIEQIGKLLVERMRSLGPYIALHLRYEKDMLAFSGCTHDLSLDEAEELRMIRENTSYWKVKDIDPVEQRSRGFCPLTPKEVGIFLTALGYPSNTPIYIAAGEIYGGESHMAELRSRYPLLMSKEKLASVEELEPFLNHASQMAALDYIVSIESDVFIPSYSGNMARAVEGHRRFLGRGRSVSPDRKALVRLFDKLDQGTMTEGKKLSYRIIDLHRRRLGSPRKRKGPISGTKGMDRFRSEETFYANPLPDCLCRTEPPLHNVSHIAK 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02482 523 CDD O-FucT_plant 115 436 IPR024709 -
Tsu05g02482 523 PANTHER OS02G0726500 PROTEIN-RELATED 4 521 - -
Tsu05g02482 523 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 4 521 - -
Tsu05g02482 523 PIRSF UCP009360 1 513 IPR024709 -
Tsu05g02482 523 Pfam GDP-fucose protein O-fucosyltransferase 115 430 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02482 Tsu-Chr5 33623830 33629746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02482 59 513 Miscellaneous Gene Families AT1G22460 69.890 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02482 - - gmx:100795727 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02482 05 33623830 33629746 Tsu05g02482 05 33623830 33629746 ECH
Tsu05g02482 05 33623830 33629746 Tsu07g01108 07 9450360 9453916 PCT