Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01053 ATGTTGGGAAGAGCAGCAACCAATGCATATTCATGGTGGTGGGCTAGCCATGTTAGgacaaaacaatcaaaatggtTGGAACAAAGCCTCCATGATATGGAGGAGATAGTGGCCGAGAGCCTCAAAATAATTGACAACAGCGGGGACTCGTTTGCCCAAAGGGCAGAAATGTACTACAGGAAGAGACCAGAACTCATAAATTTTGTGGAAGAAGCCTTTAGAGCATTTAGAGCATTAGCAGAGAAATATGATCATCTATCAAAGGAGCTACAAAGTGCGAACCGAACAATTGCCACTGTTTTCCCCGAACAAGTCCATTACAGAATAGAtgaggatgaagatgaagaaagttACCCTGAAACTAATTCATCAACTCCTAACCCTAATAACCAAACAGAAAATCAAGGCAACATTCCTAAACCTCCGAGTATCCCGAAGAAACATAATCGAAGTCCATCTATGTTGCTCTCAAAAAACGCAATACATAGGAGAAGTGCCAGTACTACAAAACCGGTTTCAATTTCAACAGTTCAAAGTTCCGGTTTGAGTAAGGTTGAAGCATTAGCCGAAATAGACAagcttcaaaaagatattttagCATTGCAGACTGAAAAAGAGTTTGTAAGGAGCTtgtatgaaaatgcatatgAAAAGTATTGGGAAATTGAAGACAAAATTACAGGAATGCAAAAAAGAGTTTGCAATTTGCAAGATGAGTTTAATATTAGTACAGTTATTGAAGATAATGATGCAAGAGCTTTAATGGCAGCCACGGCGTTAAACTCATGTAAAGAAACCCTAGATAAGTTGAAAGTGGTACAAGTACAATCATCTGAGGAAGCTAAAGAAGCACACCAAAAGTTTAAGGAAGCTCATCGCAAATTTGAAAACCTTAGCAGTAACTTAGGTTCCAAGCAACCAAATCAGCGAGACGAGGAAACAGATTCAAAAAGTAAAGATGAAGAGATAGAACTTAGCTTGGAAGAAAATATGCATGTGCGTGATGACTTAGCATCGTTGCAAGAGAGGATTAAGGAAAAGCTTGAGGAAGATTCGGGAGATTCGCTTACGATGACAGCAATTGCAGAGATGATTGATGAGCTTGTAAGTAAGGTTGTTAGTTTGGAAACGGCGGTTACTTCTCAGAATTCATTGGTAATGAGACTGAAATCAGAAGCAGATAaacttcaaacaaatataaaaagtttaGAAGAGGACAAGGAAATTCTTATTGAAGATTCAGAAAATAGTCACAAGAGGATGAAAGAATTGGAAGAGGAGTTGAAGAGAGTTAAAGCTCTAAACAAAAGTGTCGAAAGGCAAGATAAGAATATCCAAACAAACATTCATGAAGCTAATTTTAATCTTGAGCATCTTTCAGGAAGATTGAAAAATGTGAAGCTAGATGTGGAAGAGGAGAATTCGGTTCTTTCCAATTCCAAGATTACAGATTTTTCTGATGGAAAACTAAGTgagaattttgaaaaacatgaagATGATAAGTCTAGTTTGAAGGAAAATATTGATTTTAGGACTGAAGTGACGCCGGAGCTAACACAGCAGGATAAGGTTGAACCACTTGATGTTGAAACTGGGGAGAAAAAAGATCAAACTAACTTGAATCAGATGTTTGTAAGTGGATCAGATGATAGAGAAAAGATTATGTTGGAGGAGTACACATCGGTTTTAAAGAACTATAACGATGTAACTGACAAACTCAACAATACGGAGAGCAAAAATCGGAACAGCATTTTTGAATTGGCACTTCAGGTGAAGGAATTGAAGGATGTAGTTGCCACTAAGGATGAAGAGATAAACATTTTACAAAGGAAGCTTACCTTTAAAGAAAGAAATCCGGATGAAAGTCCTCATACCACTTTAACCAAGGAAACGCCTCTTGAAAACGCCTCTTCAGATATAGGTAGCACTTCTTTTGGAAACACAGGAAATATTGACACAAGGACAAGATTAATTTTGGTGAGAGAAACACAAAGTTACAAGAACCGTTCCCTTTCACCTTTAGAAAAGAAATTCCGTTCTGAAATCGATGATTTGCTCGAGCAGAATTTAGAGTTTTGGTTGAGGTTCAGCACTTCAGTTCATCAGATTCAAAAGTTCCAAGAATCTTTAGAGGACTTAAAAGCAGAACTAagaaaaataaagcataaaaaCTTGGTGTCAGAAAACAAGATCTCATCGAAAGCTATAAAATCAGAAATAAAGCCAATATTTAGACATTTGAGAGAAATAAGAACTGAGTTATCATTATGGCTAGAACACAATGATATGCTGCAAGATGAATTACAAGCTAGACATCCATCATTATGCACCTTACAAGATCAAATAGCAAGTGCCGCAAATCCAGATTCATCATCGAGAACTGGTGAACTTAGTGAGCATCAGGCTGCAAAGTTTCAAGGTGAAGTTCTCAACATGAAACAAGAGAGCAACAAGGTTTCTAGTGAACTGGAAGAAGGTTTGATTTATGTAAAAGGACTTAAAATTGATGTGGAGAAAATACTCGACGAATTGAATCAAACAATGGGATATAACAATGACATGAAACAGTCCACAAGCCGCGCTAAATTACCTATGAAGTCTTTCTTATTTGGAATCAAGTTGAAGAAGCAAAAACAATCGATGTTTGCATGTGTCACTCCAACATTACAGAAACAATACAGTGATCTAGAAGATGCTTATGATGCACCAATATAG 2715 0.3562 MLGRAATNAYSWWWASHVRTKQSKWLEQSLHDMEEIVAESLKIIDNSGDSFAQRAEMYYRKRPELINFVEEAFRAFRALAEKYDHLSKELQSANRTIATVFPEQVHYRIDEDEDEESYPETNSSTPNPNNQTENQGNIPKPPSIPKKHNRSPSMLLSKNAIHRRSASTTKPVSISTVQSSGLSKVEALAEIDKLQKDILALQTEKEFVRSLYENAYEKYWEIEDKITGMQKRVCNLQDEFNISTVIEDNDARALMAATALNSCKETLDKLKVVQVQSSEEAKEAHQKFKEAHRKFENLSSNLGSKQPNQRDEETDSKSKDEEIELSLEENMHVRDDLASLQERIKEKLEEDSGDSLTMTAIAEMIDELVSKVVSLETAVTSQNSLVMRLKSEADKLQTNIKSLEEDKEILIEDSENSHKRMKELEEELKRVKALNKSVERQDKNIQTNIHEANFNLEHLSGRLKNVKLDVEEENSVLSNSKITDFSDGKLSENFEKHEDDKSSLKENIDFRTEVTPELTQQDKVEPLDVETGEKKDQTNLNQMFVSGSDDREKIMLEEYTSVLKNYNDVTDKLNNTESKNRNSIFELALQVKELKDVVATKDEEINILQRKLTFKERNPDESPHTTLTKETPLENASSDIGSTSFGNTGNIDTRTRLILVRETQSYKNRSLSPLEKKFRSEIDDLLEQNLEFWLRFSTSVHQIQKFQESLEDLKAELRKIKHKNLVSENKISSKAIKSEIKPIFRHLREIRTELSLWLEHNDMLQDELQARHPSLCTLQDQIASAANPDSSSRTGELSEHQAAKFQGEVLNMKQESNKVSSELEEGLIYVKGLKIDVEKILDELNQTMGYNNDMKQSTSRAKLPMKSFLFGIKLKKQKQSMFACVTPTLQKQYSDLEDAYDAPI 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01053 904 MobiDBLite consensus disorder prediction 296 321 - -
Tsu07g01053 904 PANTHER PROTEIN NETWORKED 2A 1 896 - -
Tsu07g01053 904 Coils Coil 76 96 - -
Tsu07g01053 904 Coils Coil 703 730 - -
Tsu07g01053 904 MobiDBLite consensus disorder prediction 120 139 - -
Tsu07g01053 904 Coils Coil 330 350 - -
Tsu07g01053 904 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Tsu07g01053 904 MobiDBLite consensus disorder prediction 111 152 - -
Tsu07g01053 904 PANTHER PROTEIN NETWORKED 2D 1 896 - -
Tsu07g01053 904 Coils Coil 386 444 - -
Tsu07g01053 904 Coils Coil 281 301 - -
Tsu07g01053 904 Coils Coil 184 211 - -
Tsu07g01053 904 MobiDBLite consensus disorder prediction 616 648 - -
Tsu07g01053 904 Coils Coil 591 611 - -
Tsu07g01053 904 MobiDBLite consensus disorder prediction 625 648 - -
Tsu07g01053 904 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01053 Tsu-Chr7 8805405 8809001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01053 - - ccaj:109795802 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01053 07 8805405 8809001 Tsu07g01053 07 8805405 8809001 ECH
Tsu05g02578 05 35103894 35108651 Tsu07g01053 07 8805405 8809001 PCT