Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02578 atgttacaAAGGGCAGCAAGCAATGCATATTCATGGTGGTGGGCTAGCCACATTAGGACAAAGCAATCAAAATGGTTGGATCAATGCCTCCAAGATATGGAGGAGAAGGTGACTGACACATTAAGAGTCTTAAAAAATGATGGAGACTCATTTTCACAAAGAGCAGaaatgtattacagaaaaaggCCAGAGCTTGTTGAATTTGTAGAAGAAGCCTTTAGAGCATATAAAGCCTTAGCAGAAAGATATGATCATTTATCAAGAGAACTTCAAAGTGCAAACAGAACAATTGCAAGTGTCTTCCCTGATCAAGTTCCATGTCAAatcgatgatgatgatgacgacgaaAGTGAGGCAGGAATTATCTCACCATCTCCTGACCACAACAGCCAATTTGAGAAATCACCAACCATTCCAAAAGTTCCAAAGATTCCAAAGAAAGATTTTCGAAGTCCTTCGATGTTGTTATCGCGAAAAGGTCCAATTAGGAGAAATGCTTCTATTTCACCAAAATATTTTCCAACACCTTCAAGATCAGGTCTCACGAAAGCTGAAGCATTAGGTGAAATCGACAAACTTCAGAAAGAGATTTTAGCGTTGCAGACCGAGAAAGAGTTTGTGAGAAGTGTGTACGAGCGTGCGTACGAAAAGTACTGGGAAATCGAAGATCATATAACAGGTACGCAAAAAAATGTTTGCAGTTTGCAAGATGAATTTGGTGTCGGTACTGTCATTGAAGACGACGATGCTAGAGCTTTAATGGCAGCAACAGCATTGAAATCGTGTCAACAGACGCTTTCAAAGCTGGAAAAGATTCAAGCACAATCATCCATAGAAGCTAAAGTTGAATATGAAAGGGTTAGAAAAGCTCATGAGATGTTTGAGAGTCTTAGAGATCAATTTATCAGTAAATTCATGAATCAACAAGAACACGAACATGTCGAAAAATGTAAGAGCATAATAAGTGAAGAACAGAAACACATTGATGAAGAGATAGCTAGTTTGGAACAACAAGAGAAAGATGTTGTTTTGTTGAGAGAAACgatcaaagaaaaattagaaCAAGATTCTTCAAACTCTCTTACCGTTACCGAAATGGCCGAATGTATCGATGAGCTTGTGAATAAGGTTGTTACATTGGAAACCGCGGTGTCTTCTCAAACTGGTATGGTTAACCGATTGAGATCAGAAACCGATGGACTTCAAACAAATATCAAGAAATTGGAAGAGGACAAGGAAATTCTTAAAGCAGGAGCAGAAGTTACTAATAAGAAGCTAAAAGAATTTGAAGAGGAATTGTTGAGAGTGAAAATTCTTAACAAAAGTGTTAAATCACAAGATAATAGCCTCCGAACACATTTTACCGAAGCTAGTTGTAATATTGAGCATTTATCCGGAAAGTTGAATAATATGAAGCATGATGTGGATGATGTGAATTTAGTTCTttacaagaagaagaaaactaatTCTGATGTTGATGATTCTATTATGAAGGATGTTAATACAACAGACGAAAGTGGTGGCGAAAATTTGGATGCTAAGAACTCTATTATGAGtcaaaatactaattttattaCTGAAAGGATTGAAAAAATGGGACAACATGAGAAAGATGATATATCTGATACAGTGAGCAGTCTTGATATTGAATCACAAGATTTGGAGACAGGTGAGGGTGATCAGCCAAATTGGAGGCAGATGTTTTTGAGTGGATTAGATGATAGAGAGAAAATTCTGTTGGAGGAGTATACATCTGTTTTGAGAAACTATAAAGATGTTAGAGTGAAGCttaatgatgttgaaaagaaaaatagggACAGCATTTTTGAGTTGGCACTTGAGTTAAGGGAAATGAAGAATGCTCTTGTGACAAAGGACAAAGAGATAcaatttctaaatcaaaagATAAACTGTCCAGACTCAACTCCAGATGAAAGTCCATACACAACAGCAACAGAATACAAATACACACCAAATGAAGCAATTTTGAGAAAATCAGGTCAAGGATCCAACATACAGGAGATAGATATTTCATCTCTTAACATGGACTCAAACTCAATAACAACATCTTTTGCAGACCAACATGATCAAAAGTCACCAACCCTTGGCCTCAAAATGACCCTTGGGAAGCTCATGGCAGACCAAGATAACAGCCTTTCGGATTTAGAAAAGAAATTCCGTTCGGACATCGATGACCTACTCGAGGAAAATCTTGAGTTTTGGCTAAGATTTAGCACCTCAGttcatcaaattcaaaagtttcaAAACTCAATTCAGGACTTAAAAGCAGAACTGAAGACAATAAAGGAAAACAACAAATCCGAAGGACATTCGCATTCGAAACATCATCAATCTGCACAATCTCAACTTAGGCCGATTTTCCGACATTTAAGAGAGATTAGAACTGAATTATCTCTTTGGCTTGAACACAATGCAGTGTTGCAGGATGAATTACAAGGTAGATATTCATCATTATGCAACATTCAAGAGGAAATTGCAAGAGCAGCAGTTAAAAATGCACAACCTCCTAATGCTGAAAAAGGTGCTGAGATAATAAGTGGTTATCAAGCTGCAAAGTTTCAAGGTGAGATTCTTAACATGAAACAAGAAAATAGTAAAGTTGCAAGTGAATTGCAAGCTGGTCTTAGTCTTGTGAAAGGAATGAAAATTGACGTTGACACGACACTTGATGAACTTGATCATGATATTGGGATTAGTAGTGTTCATAGTGACACAACAAAAAAGAATACATCAAAAGGTACTAGAATACCTTTGAGGTCTTTCTTGTTTGGTGTTAAATTAAAGAGACAAAagcatcatcaatcatcatcatccatatCATCAGCATCATCACTGTTTGCTTGTGTCAATCCTGCACTGAATAAACAATATAGTATCAATGAACATGCACCAGCTCCAATAGAGAGGGAGGAGGAGGCGGAGGAGGATATTTGA 2955 0.3516 MLQRAASNAYSWWWASHIRTKQSKWLDQCLQDMEEKVTDTLRVLKNDGDSFSQRAEMYYRKRPELVEFVEEAFRAYKALAERYDHLSRELQSANRTIASVFPDQVPCQIDDDDDDESEAGIISPSPDHNSQFEKSPTIPKVPKIPKKDFRSPSMLLSRKGPIRRNASISPKYFPTPSRSGLTKAEALGEIDKLQKEILALQTEKEFVRSVYERAYEKYWEIEDHITGTQKNVCSLQDEFGVGTVIEDDDARALMAATALKSCQQTLSKLEKIQAQSSIEAKVEYERVRKAHEMFESLRDQFISKFMNQQEHEHVEKCKSIISEEQKHIDEEIASLEQQEKDVVLLRETIKEKLEQDSSNSLTVTEMAECIDELVNKVVTLETAVSSQTGMVNRLRSETDGLQTNIKKLEEDKEILKAGAEVTNKKLKEFEEELLRVKILNKSVKSQDNSLRTHFTEASCNIEHLSGKLNNMKHDVDDVNLVLYKKKKTNSDVDDSIMKDVNTTDESGGENLDAKNSIMSQNTNFITERIEKMGQHEKDDISDTVSSLDIESQDLETGEGDQPNWRQMFLSGLDDREKILLEEYTSVLRNYKDVRVKLNDVEKKNRDSIFELALELREMKNALVTKDKEIQFLNQKINCPDSTPDESPYTTATEYKYTPNEAILRKSGQGSNIQEIDISSLNMDSNSITTSFADQHDQKSPTLGLKMTLGKLMADQDNSLSDLEKKFRSDIDDLLEENLEFWLRFSTSVHQIQKFQNSIQDLKAELKTIKENNKSEGHSHSKHHQSAQSQLRPIFRHLREIRTELSLWLEHNAVLQDELQGRYSSLCNIQEEIARAAVKNAQPPNAEKGAEIISGYQAAKFQGEILNMKQENSKVASELQAGLSLVKGMKIDVDTTLDELDHDIGISSVHSDTTKKNTSKGTRIPLRSFLFGVKLKRQKHHQSSSSISSASSLFACVNPALNKQYSINEHAPAPIEREEEAEEDI 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02578 984 Coils Coil 183 210 - -
Tsu05g02578 984 Coils Coil 321 355 - -
Tsu05g02578 984 PANTHER PROTEIN NETWORKED 2A 1 965 - -
Tsu05g02578 984 Coils Coil 751 771 - -
Tsu05g02578 984 Coils Coil 615 635 - -
Tsu05g02578 984 PANTHER PROTEIN NETWORKED 2D 1 965 - -
Tsu05g02578 984 Coils Coil 391 446 - -
Tsu05g02578 984 Coils Coil 69 96 - -
Tsu05g02578 984 MobiDBLite consensus disorder prediction 110 144 - -
Tsu05g02578 984 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Tsu05g02578 984 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02578 Tsu-Chr5 35103894 35108651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02578 - - mtr:MTR_5g066340 1518.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02578 05 35103894 35108651 Tsu05g02578 05 35103894 35108651 ECH
Tsu05g02578 05 35103894 35108651 Tsu07g01053 07 8805405 8809001 PCT