Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00667 ATGGCTTCCAACAACAAATTCTTTGCCACCATTTTAGTGTTTTCTCTTCTTGCTTACTCCACATTCACTGTGGCTAATGGTTCATGCCCACCATCACCAAAGCCAAAATCACCACCTTCGTCCAAAGGTCATTGTCCAAAGGACACCTTAAAGCTAGGTGTTTGTGCCGATCTTTTAGGACTAGTTAATGTTATTGTTGGCAATCCTCCTTCCGGTAGTAATTGTTGTGCATTGATCAAAGGTTTGGCTGATCTGGAGGCCGCGGTCTGTCTTTGCACCGCAATTAAGGCCAATGTACTTGGAATAAACTTGAACGTACCTCTCACACTCTCTTGGGTTCTTAGTGCATGTCAAAAGAATGTCCCTTCCGATTATCAATGTGCCTAA 387 0.4341 MASNNKFFATILVFSLLAYSTFTVANGSCPPSPKPKSPPSSKGHCPKDTLKLGVCADLLGLVNVIVGNPPSGSNCCALIKGLADLEAAVCLCTAIKANVLGINLNVPLTLSWVLSACQKNVPSDYQCA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00667 128 CDD HPS_like 45 127 IPR027923 -
Tsu07g00667 128 PANTHER LIPID TRANSFER PROTEIN 28 128 - -
Tsu07g00667 128 PANTHER LIPID TRANSFER PROTEIN 1 26 - -
Tsu07g00667 128 Pfam Hydrophobic seed protein 45 128 IPR027923 -
Tsu07g00667 128 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 48 127 IPR036312 -
Tsu07g00667 128 PANTHER - 1 26 - -
Tsu07g00667 128 PANTHER - 28 128 - -
Tsu07g00667 128 SMART aai_6 45 127 IPR016140 -
Tsu07g00667 128 Gene3D - 44 128 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00667 Tsu-Chr7 5316905 5317799 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00667 37 127 Acyl Lipid Metabolism Gene Families AT4G22490 34.066 5.34e-14 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00667 - - mtr:MTR_3g106750 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00667 07 5316905 5317799 Tsu07g00667 07 5316905 5317799 ECH
Tsu01g00686 01 6032212 6032751 Tsu07g00667 07 5316905 5317799 PCT