Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00653 ATGGATCCGAGTGTTTTTTCACTGGAAGATGGATTTGAAGTAGTACACCAAAATGGTGTACATGAACACCAACTGTTTGATTCTGCAAAAGATGGTGTTGATTCAAATGTAGACCATGAAATTAAAGAAAGTTTAGTGTTGAAtggagattttgaaaattttgatgataCTTTGTCTATGGAAGAAGGATCGAATGGTAAAATAGAGGGAGACAATGTTAATGTTTCTAAGGAAGAGGAAGTTGAAATCGTAGATGAAACGGATAAATCTAGAACACGGAAAGGTCTTGTTAAGAATAAGAATGCGAAACTGCCAAGTGCTAAAGGTGTTCATACAAGTTCGGTAAGAAATAACAAAGACGGGAAAGATAAAGAGGCGACAGTTTCAAATGGTACTTCCACTTTAGACTCTCATCTTAGACAGCCGATTAAGAACAAAGCAGTCAATGACAAGCAGACTCGGTTGTCCAAGCACCCTGGAAAGTCTGATGCAGCATCTTCTGAAGCACCAACGGAGAAGACTAGACCACGATTAGTAAAGAAAGAACCCCTTGATAATATTCCAGGAAAAGCTGAATCATCTTcTCCTACATCAGAAGATGCCAAACCTCGTAGAGTGGGGACAATGCCAACTTATGGATTCAGTTTCAAATGTAATGAGCGAGCTGAGAGAAGAAAAGAGTTTTACTCTAAGCTCGAGGAAAGGATTCATGCGAAGGAAGTTGAGGAGAGCAACCTGCAAGCAAAAACCAAGGAGAGCCAAGAAGCTGAGATTAAGAGGCTTAGAAAAAAATTAGCATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAGCCTCCTCCTTCTAGGGTGGAGTTGAAGAAGATACCAACGACAAGAGCAAAATCTCCCAAGCTTGGTCGTAAGAAGAGTTCAACATCTTCAGAGCCAGAAGGACACACCAACAGCAGTGTTCTACAATGTCGTTCAAGTCTGGATGAGAAAGTGTCTCAGAATAACACCATTAAAGGAATTAGTCCTGTTCATTCAAAGAAGCCACTACGAAGATCTCTCCCTCCTCGACTGGCTCCTGAAAGGATCAGTTCGTCCAATTCAGCAACTGCACGGACTCCGTCTAAGATGGTGAATGATGAGAAAACCTCCTTATCTAGTGTAACAACTGAAGTTACCACCTTGTCTATTGCAACAAGGGAAGAGAAAGTTGAAGCAGCTGCAGCTACTGAGGAGAACAGTGCCTTGTCTGATGAGACAAGTGAAACTCCAACTCTGAACATAGATTCCCATGTGAATGGTGATATAGTCATTGAAGACAAACCACAGCGCACCTTGGTACAAGAACCTATAGCAGCAGAGTATTAA 1359 0.4091 MDPSVFSLEDGFEVVHQNGVHEHQLFDSAKDGVDSNVDHEIKESLVLNGDFENFDDTLSMEEGSNGKIEGDNVNVSKEEEVEIVDETDKSRTRKGLVKNKNAKLPSAKGVHTSSVRNNKDGKDKEATVSNGTSTLDSHLRQPIKNKAVNDKQTRLSKHPGKSDAASSEAPTEKTRPRLVKKEPLDNIPGKAESSSPTSEDAKPRRVGTMPTYGFSFKCNERAERRKEFYSKLEERIHAKEVEESNLQAKTKESQEAEIKRLRKKLAFKATPMPSFYQEPPPSRVELKKIPTTRAKSPKLGRKKSSTSSEPEGHTNSSVLQCRSSLDEKVSQNNTIKGISPVHSKKPLRRSLPPRLAPERISSSNSATARTPSKMVNDEKTSLSSVTTEVTTLSIATREEKVEAAAATEENSALSDETSETPTLNIDSHVNGDIVIEDKPQRTLVQEPIAAEY 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00653 452 MobiDBLite consensus disorder prediction 233 264 - -
Tsu07g00653 452 MobiDBLite consensus disorder prediction 401 431 - -
Tsu07g00653 452 MobiDBLite consensus disorder prediction 309 339 - -
Tsu07g00653 452 MobiDBLite consensus disorder prediction 79 95 - -
Tsu07g00653 452 MobiDBLite consensus disorder prediction 168 187 - -
Tsu07g00653 452 MobiDBLite consensus disorder prediction 233 386 - -
Tsu07g00653 452 PANTHER PROTEIN WVD2-LIKE 5-RELATED 1 442 - -
Tsu07g00653 452 Pfam Targeting protein for Xklp2 (TPX2) domain 214 284 IPR027329 -
Tsu07g00653 452 PANTHER PROTEIN WVD2-LIKE 4 1 442 IPR044833 GO:0008017
Tsu07g00653 452 MobiDBLite consensus disorder prediction 410 427 - -
Tsu07g00653 452 Coils Coil 229 259 - -
Tsu07g00653 452 MobiDBLite consensus disorder prediction 79 217 - -
Tsu07g00653 452 MobiDBLite consensus disorder prediction 357 386 - -
Tsu07g00653 452 MobiDBLite consensus disorder prediction 143 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00653 Tsu-Chr7 5184443 5188741 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00653 - - gmx:100804879 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00653 07 5184443 5188741 Tsu07g00653 07 5184443 5188741 ECH
Tsu01g00691 01 6073693 6079595 Tsu07g00653 07 5184443 5188741 PCT