Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00691 ATGATGGATCTGATTAATCCGTTGCCTTCTGATGGACTTGATGTGGTCCATCAGAATGGCGTTCGTGATGAACCTTCTAATTCTGGAGAGGACGGTGTTGTTTCAAATGATTTAGACCCTCGTGTTACTGAAACTACAGAGACTATAGGTCTGAATGGAAATCTTGAAAGTTTGAAGCAGTTAGAAAGCACTGCAACTGAAAACCTGCCCGTGGGGGAAATTGAAGGATCAAATGACAACGTGGATGGCAATAATATAACCAGTCCTAAGGAAAAGGAAGTGAAAATAACAGTTCAAAAGGAACAATCAAAGGCACAAAAGGGTCCTGTAAAGAATAAGAATGCAAAGGTTGCTAGTTCCAGTGGTGTTCATGCAACTTTGGTGAAAAATAGCAAAACTGGAAAAGACAAACAGGCATCATCTGCTGTTTCAAACGGCACCTCTGCCTTAGACCCTCGCCCAAGACAGCAGCCTATTAAAACCAAATCGTTCAATGATCGGCAGTCTCAATTGTCAAAGAATCCTTCAAAGTCTACTGCAGCATCTTCTGAAGTTGCAGGGGAGAAGAAAAAgccaatatcatcaaaaaagggACCCCTGGTTAAAGTTCAAGGAGAAGCAGAATCTTCTCTTACCAATGCCGAAGATGCCAAACCTCGCAGGGTGGGGACACTTCCAAATTACGGATTCAGTTTCAGGTGCGGTGAACGAgctgagaaaaggagagagTTCCTCACTAAGGttgaggaaaagattcaggcaAAGGAAGAGGAGAAGAGTAGCTTGCAAGCAAAATCCAAGGAGAGCCAAGAAGCGGAGATTAAAAAGCTTAGGAAGAGCCTAACTTTTAAAGCAACTCCATTGCCAACTTTCTATCAGGAGCCTGCTCCTCCTAAAGTGGAGCTGAAGAAGATACCAACTACAAGAGCAAAATCTCCCAAGCTCGGTCGGAAGAAGAATTCAACAAATTCAGAGTCTGATGGAAACGGAAGCACCAGTTCTCGACAAGGTCGTTTAAGTCTGAATGAGAAAGTGTTACAAAGCAACTCCACTAAAGAAGTTGCTCTTGTCCATCCAAAGAAGCCGCTACGCAAGTCCCTTCCTACTCGACTCACTCCTGAAAAGATCAATTCAGCAGCTGCACCAAAGAAAGGTAGTGCAACAAAGAAAGCTACTAGCTTATCCAATGCTAAAGGGGAAGAGAAAACCGAGACAACCGAAGTCAATGAAGAAAACAGTACCTTGTCGAGTGAGACAAATGTTGCTCTACCTCTGAATGTGGTTCCTTCAGATAAGCCAAGTGAAGCAGAATCTCATGGCAATGGTGACATATTGGTTGAAGAGAATCATCAGCTCGTGTTGTCCCAAGAACCAATCACAACCGTGCATTGA 1392 0.4167 MMDLINPLPSDGLDVVHQNGVRDEPSNSGEDGVVSNDLDPRVTETTETIGLNGNLESLKQLESTATENLPVGEIEGSNDNVDGNNITSPKEKEVKITVQKEQSKAQKGPVKNKNAKVASSSGVHATLVKNSKTGKDKQASSAVSNGTSALDPRPRQQPIKTKSFNDRQSQLSKNPSKSTAASSEVAGEKKKPISSKKGPLVKVQGEAESSLTNAEDAKPRRVGTLPNYGFSFRCGERAEKRREFLTKVEEKIQAKEEEKSSLQAKSKESQEAEIKKLRKSLTFKATPLPTFYQEPAPPKVELKKIPTTRAKSPKLGRKKNSTNSESDGNGSTSSRQGRLSLNEKVLQSNSTKEVALVHPKKPLRKSLPTRLTPEKINSAAAPKKGSATKKATSLSNAKGEEKTETTEVNEENSTLSSETNVALPLNVVPSDKPSEAESHGNGDILVEENHQLVLSQEPITTVH 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00691 463 MobiDBLite consensus disorder prediction 101 183 - -
Tsu01g00691 463 MobiDBLite consensus disorder prediction 317 354 - -
Tsu01g00691 463 PANTHER PROTEIN WVD2-LIKE 4 2 453 IPR044833 GO:0008017
Tsu01g00691 463 MobiDBLite consensus disorder prediction 251 280 - -
Tsu01g00691 463 MobiDBLite consensus disorder prediction 409 424 - -
Tsu01g00691 463 Coils Coil 245 275 - -
Tsu01g00691 463 MobiDBLite consensus disorder prediction 1 230 - -
Tsu01g00691 463 MobiDBLite consensus disorder prediction 21 85 - -
Tsu01g00691 463 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 453 - -
Tsu01g00691 463 Pfam Targeting protein for Xklp2 (TPX2) domain 230 301 IPR027329 -
Tsu01g00691 463 MobiDBLite consensus disorder prediction 251 463 - -
Tsu01g00691 463 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00691 Tsu-Chr1 6073693 6079595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g00691 - - gmx:100786958 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00691 01 6073693 6079595 Tsu01g00691 01 6073693 6079595 ECH
Tsu01g00691 01 6073693 6079595 Tsu07g00653 07 5184443 5188741 PCT