Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00641 ATGGGTAGGaacaaaaaccaaattttttatgACAAAAGAGATGGGTTTTTCTCAGTTTCAGATTTGGGGTATCAATCTCATCATGAGGAATACTATTATCCTGGAGCTGGAGGTTTGTTTGCTAGCGTTGGTCAAATGGGAATAGGCTTTGGTGTTCAACAGCCAAATCCTCCTGATTCCTCTCAAAATGGTGATGACCCTAAACTTCCTTTCAATGAATTATATGTTAAGTATATTCAATCACTCTTGAAATTTGAGCCAAATGGGGTTAAGAATGTGAAAGGGGAAGGTGAAGAAGTTGTTAAGGTGAAGAATAAAAATGGTGGATTTAAACTTAAGATTAAGATAAGGAATCCTTCTATTAGGAGGTTGTGTAGTGGAGCAATTGCTGGGGCTATCTCTAGAACAACTGTGGCACCTTTGGAGACTATTAGGACTCATTTGATGGTTGGAAGTAGTGGTCATTCTACTACTGATGTTTTTCAAGATATTATGAAAACGGATGGATGGAAGGGTTTGTTTAGGGGTAATCTTGTTAATGTCATTCGGGTTGCACCTAGCAAAGCCATTGAGCTGTTTGCTTATGATACGGTAAACAAGAACCTTTCCGCAAAGCCTGGGGAGCAGTCCAAACTCCCAGTTCCTGCATCATTGATTGCAGGTGCTTGTGCTGGAGTGAGTTCAACCATATGCACGTATCCGCTTGAACTACTCAAGACTAGACTAACTATCCAGAGAGGTGTTTACAATGGTCTTGTTGATGCATTTgtgaaaataattaaagaagAGGGTCCTGCAGAACTTTACAGAGGCCTGACTCCTAGTCTTATTGGAGTTATTCCATATTCGGCTACCAATTACTTTGCCTATGATACTCTACGGAAAGCATACCGAAAGTTTTTTAAACAAGAGAAGATTGGCAACATTGAAACCCTTTTGATTGGTTCAGCAGCCGGTGCTATTTCAAGTACTGCAACTTTTCCACTCGAGGTGGCTCGCAAGCATATGCAAGTTGGAGCTCTTAGTGGAAGACAGGTTTACAAAAATGTGGTTCATGCACTTGTTACCATACTTGAACAAGAAGGGATCCAGGGTCTATATAGAGGGCTTGGACCTAGTTGCATGAAATTAGTACCAGCCGCCGGAATCTCGTTCATGTGTTATGAAGCATGCAAGAAGATATTGATAGATGACGAGGAGGAGGAATAG 1209 0.4012 MGRNKNQIFYDKRDGFFSVSDLGYQSHHEEYYYPGAGGLFASVGQMGIGFGVQQPNPPDSSQNGDDPKLPFNELYVKYIQSLLKFEPNGVKNVKGEGEEVVKVKNKNGGFKLKIKIRNPSIRRLCSGAIAGAISRTTVAPLETIRTHLMVGSSGHSTTDVFQDIMKTDGWKGLFRGNLVNVIRVAPSKAIELFAYDTVNKNLSAKPGEQSKLPVPASLIAGACAGVSSTICTYPLELLKTRLTIQRGVYNGLVDAFVKIIKEEGPAELYRGLTPSLIGVIPYSATNYFAYDTLRKAYRKFFKQEKIGNIETLLIGSAAGAISSTATFPLEVARKHMQVGALSGRQVYKNVVHALVTILEQEGIQGLYRGLGPSCMKLVPAAGISFMCYEACKKILIDDEEEE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00641 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 118 201 IPR018108 -
Tsu07g00641 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 296 IPR018108 -
Tsu07g00641 402 Coils Coil 392 402 - -
Tsu07g00641 402 ProSiteProfiles Solute carrier (Solcar) repeat profile. 306 394 IPR018108 -
Tsu07g00641 402 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 27 401 - -
Tsu07g00641 402 Pfam Mitochondrial carrier protein 306 397 IPR018108 -
Tsu07g00641 402 Pfam Mitochondrial carrier protein 120 203 IPR018108 -
Tsu07g00641 402 Pfam Mitochondrial carrier protein 211 299 IPR018108 -
Tsu07g00641 402 PANTHER SOLUTE CARRIER FAMILY 25 27 401 - -
Tsu07g00641 402 SUPERFAMILY Mitochondrial carrier 119 390 IPR023395 -
Tsu07g00641 402 Gene3D Mitochondrial carrier domain 115 400 IPR023395 -
Tsu07g00641 402 PRINTS Mitochondrial carrier protein signature 227 245 IPR002067 GO:0055085
Tsu07g00641 402 PRINTS Mitochondrial carrier protein signature 136 150 IPR002067 GO:0055085
Tsu07g00641 402 PRINTS Mitochondrial carrier protein signature 176 196 IPR002067 GO:0055085
Tsu07g00641 402 PRINTS Mitochondrial carrier protein signature 315 337 IPR002067 GO:0055085
Tsu07g00641 402 PRINTS Mitochondrial carrier protein signature 123 136 IPR002067 GO:0055085
Tsu07g00641 402 PRINTS Mitochondrial carrier protein signature 269 287 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00641 Tsu-Chr7 5069120 5073176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00641 305 402 Organic Solute Cotransporters AT4G32400 32.353 1.42e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00641 K14684 - qsu:111999876 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00641 07 5069120 5073176 Tsu07g00641 07 5069120 5073176 ECH
Tsu01g00701 01 6144416 6157120 Tsu07g00641 07 5069120 5073176 PCT