Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00336 ATGGGCGaagaaacacaacaacaacttcAACCACAATCCCTAACCGGAacacaaccacaacaacaaccacaGCCTCCGCCACAAGAGGCTTCTTCCGATATCTCCGCCGTCACCAACGTCGTCGGAGTCGAAACAATAATTCCTGTAGAATCCGAACTCACCAATGTTCCGCCACACACCAATTCCCCTGCCACAAAAATCCCTCTCCGTCCTCGTAAGATCCGGAAAGTCTCACCGGACCCGACAACCACCGAATCACAATCGGAAACCCTAAAATCAACCAATTCAACCGCCACCGGAAAATCTTGCGGACGGAACAACAAAACGGTTCAACCATTACGAGCCCTAGCTGCTCCGAGAATCGTAGCTAGGTCACTTTCGTGCGAAGGTGAAGTTGAGATCGCAATTCGCTACCTTCGTAACGCAGACCCACTTCTTTCCCCTCTAATCGATATTCATCAACCACCTACCTTCGATAATTTCCATTCACCATTCCTTGCTCTAACTCGTAGCATTTTGTATCAACAACTGGCTTTTAAAGCCGGTACATCGATCTATACGCGGTTCATTGCTCTATGTGGTGGTGAAGCTGGTGTTGTTCCTGATACTGTTCTTGCTTTAAATGCACAGCAGCTTCGTCAAATTGGGGTTTCTGGGAGGAAGGCGAGTTATCTTCACGATTTGGCTAGGAAGTATCAGAATGGGATACTTTCTGATTCCGCCATTGTAAATATGGATGATAAATCGCTTTTCACGATGCTTACTATGGTTAATGGGATTGGTTCTTGGTCTGTTCATATGTTTATGATTTTCTCACTTCATAGACCTGATGTTCTACCGATTAATGATCTTGGTGTTCGTAAAGGGGTTCAAATTCTTTATAATCTTGATGACTTGCCTCGACCGTCTCAGATGGATCAATTGTGTGAGAAGTGGAGGCCTTATCGCTCTGTGGCTTCGTGGTATATGTGGAGGTTTGTTGAAGCTAAGGGAACTCCTTCGAGTGCTGTGGCTGTTGCTACTGGTGCTGGCTTGCAGCAACACCAGATGGAGCAGcaccaacaacaacagcagcagcaacagCATCCTTCACAACAACAGCTTATGGATCCCATGAATAGCATGTTTAATATCGGGGCTGCCTGTGCTTGGGGACAGTGA 1161 0.4384 MGEETQQQLQPQSLTGTQPQQQPQPPPQEASSDISAVTNVVGVETIIPVESELTNVPPHTNSPATKIPLRPRKIRKVSPDPTTTESQSETLKSTNSTATGKSCGRNNKTVQPLRALAAPRIVARSLSCEGEVEIAIRYLRNADPLLSPLIDIHQPPTFDNFHSPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPDTVLALNAQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQILYNLDDLPRPSQMDQLCEKWRPYRSVASWYMWRFVEAKGTPSSAVAVATGAGLQQHQMEQHQQQQQQQQHPSQQQLMDPMNSMFNIGAACAWGQ 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00336 386 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 1 380 - -
Tsu07g00336 386 Gene3D - 138 325 - -
Tsu07g00336 386 PANTHER BNAC05G15000D PROTEIN 1 380 - -
Tsu07g00336 386 Pfam HhH-GPD superfamily base excision DNA repair protein 170 313 IPR003265 GO:0006284
Tsu07g00336 386 MobiDBLite consensus disorder prediction 343 367 - -
Tsu07g00336 386 CDD ENDO3c 165 326 IPR003265 GO:0006284
Tsu07g00336 386 SUPERFAMILY DNA-glycosylase 154 326 IPR011257 GO:0003824|GO:0006281
Tsu07g00336 386 MobiDBLite consensus disorder prediction 1 19 - -
Tsu07g00336 386 MobiDBLite consensus disorder prediction 1 36 - -
Tsu07g00336 386 SMART endo3end 173 328 IPR003265 GO:0006284
Tsu07g00336 386 MobiDBLite consensus disorder prediction 80 107 - -
Tsu07g00336 386 MobiDBLite consensus disorder prediction 52 107 - -
Tsu07g00336 386 Gene3D Hypothetical protein; domain 2 162 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00336 Tsu-Chr7 2543999 2549127 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00336 K01247 - gmx:100790760 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00336 07 2543999 2549127 Tsu05g00748 05 6314374 6315445 ECH
Tsu07g00336 07 2543999 2549127 Tsu07g00336 07 2543999 2549127 ECH