Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03729 atgataactTTAACTGATTTCTACCATGTCATGACAGCAATGGTGCCACTTTATGTTGCTATGATTTTAGCTTATGGTTCTGTAAAATGGTGGAAAATATTCTCACCTGATCAATGTTCAGGAATCAACCGTTTTGTAGCACTGTTTGCAGTTCCACTTCTTTCATTCCATTTCATAGCATCAAACAATCCTTACAAAATGAACCTTAGGTTCTTAGCAGCTGATACACTgcaaaaactcataattttatCTCTTCTTGCAATTTGGAGTAATTTTTCCAAAAGGGGTTGTTTGGAATGGACAATAACACTTTTTTCATTATCAACTTTACCAAACACTTTGGTTATGGGTATTCCTTTACTGAAAGGAATGTATGGTGATTTTTCAGGGAGTTTGATGGTACAAATTGTTGTTCTTCAATGTATCATTTGGTATACTTTGATGCTTTTCATGTTTGAGTTTAGAGGAGCAAGGTTGTTGATTTCAGAACAGTTTCCAGACACTGCTGGTTCTATTGTTTCAATCCATGTTGATTCTGATGTTATGTCACTTGATGGTAGAACACCATTAGAAACTGATGCTGAAATCAAACAAGATGGTAAACTTCATGTTACTGTTAGAAAATCAAATGCTTCAAGATCAGATATTTACTCAAGAAGATCACAAGGTCTTTCTTCAAATACTCCTAGACCTTCAAATCTTACTAATGCTGAGATTTACTCTCTTCAATCTTCTAGAAATCCAACACCAAGAGGGTCTAGTTTTAATCATACTGATTTTTACTCTATGATGGGTGGTGGTAGAAACTCTAATTTTGGTTCTTCTGATGTTGTTAATTACGGTTTATCTGCTAATTCAAGAGGTGTTACTCCAAGACCTTCTAATTATGAAGAAgatgctaataataataataataataatgctaaGAAATTCAAAAACTATCCTGCACCTAATCCAGGAATGTTTTCACCTACTAATAATAATGGTGGTAACaaaaatgttaatgttaataagAAGAGTAATAATATTAATGGTCAAAGTCAACAGAAACAAGAAGATCTTCATATGTTTGTTTGGAGTTCAAGTGCTTCACCTGTTTCTGATGTGTTTGGTGGACATGAATTTGGTGCTCATGATCAGAATCAGAAAGAAGTTAAATTGAATGTATCTCCAGGAAAAGtagaGGGTCATAGAGAAACTCAAGAGGACTATATGGAGAAAGATGAATTCAGCTTTGGAAATAGAGGAATGGAAAGGGAAATGAATCAACTTGCAGGTGAGAAAGTTGGAGATGGAAAATCTAAAGTTATGCCACCAGCCAGTGTTATGACAAGGCTTATATTGATTATGGTTTGGAGAAAACTTATCAGAAATCCAAACACTTACTCAAGCTTAATTGGACTCACTTGGTCTCTAGTTTCATTTAGGTGGAATATTGAGATGCCTGCCATTATAGCAAAGTCTATTTCCATACTGTCAGATGCAGGCCTTGGCATGGCCATGTTCAGTCTTGGTTTGTTTATGGCTTTGCAACCAAAAATCATAGCATGTGGAAATTCCATAGCAGCTTTTTCTATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCACTTGCTGTTGGACTCAAAGGTGTTCTCTTTCATGTTGCAATTGTGCAGGCAGCTCTTCCCCAAGGAATTGTCCCATTTGTCTTTGCTAAGGAATATAATGTACATCCTGATATTCTAAGCACAGGTGTCATTTTTGGAATGTTGATTGCTTTGCCCATTACTCTTGTGTACTACATCTTAATGGGGCTATGA 1815 0.3504 MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTLQKLIILSLLAIWSNFSKRGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARLLISEQFPDTAGSIVSIHVDSDVMSLDGRTPLETDAEIKQDGKLHVTVRKSNASRSDIYSRRSQGLSSNTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMGGGRNSNFGSSDVVNYGLSANSRGVTPRPSNYEEDANNNNNNNAKKFKNYPAPNPGMFSPTNNNGGNKNVNVNKKSNNINGQSQQKQEDLHMFVWSSSASPVSDVFGGHEFGAHDQNQKEVKLNVSPGKVEGHRETQEDYMEKDEFSFGNRGMEREMNQLAGEKVGDGKSKVMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFRWNIEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSIAAFSMAVRFLTGPAVMAAASLAVGLKGVLFHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILMGL 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03729 604 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 604 - -
Tsu06g03729 604 MobiDBLite consensus disorder prediction 212 234 - -
Tsu06g03729 604 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1A 1 604 - -
Tsu06g03729 604 Pfam Membrane transport protein 9 599 IPR004776 GO:0016021|GO:0055085
Tsu06g03729 604 TIGRFAM 2a69: auxin efflux carrier 1 604 IPR014024 -
Tsu06g03729 604 MobiDBLite consensus disorder prediction 283 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03729 Tsu-Chr6 49301750 49306796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03729 1 595 Organic Solute Cotransporters AT1G73590 71.270 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03729 K13947 - gmx:100499637 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00020 02 132463 135756 Tsu06g03729 06 49301750 49306796 PCT