Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03302 ATGTCTAAACCTCTGAGTGATCATCCTCTTCCGCAAGCGGAAACAACATGTGCATCACTTCTTCAAGAACTTCAGaTAATATGGCATGAAGTTGGGGAGTCTGAGTCTGAAAAAGATAGGATGTTGTTTGAGATTGAACAAGAATTTCTAGAAGTATACAGAAGAAAGATAGATAGAGCTAATTGCTCTAGAGCTCAAATAAGGCAGGAAATTGCTGATTCCGAGGCAGAACTTACAGCTATCTGTTCAGCAATGGGAGAGCGACCAGTACATAGTAGACAGTCTGGTCAAAAAGCTAGAAGCTTGAAGGAAGAGCTAGAAATGATTGTCCCGGAGCTGGAGGAAATGCAAAAACGAAAGCATGATCGTAGAAATCAATTCATAGAAGTTCAAGAGCAGATTCAAAGTATCTCAAATGAGATCCATTGTCCAAGAGAAATTATCCCGTTCATTGTAGATGATAATGATTTATCATTGAGGAAACTTGAAGAATTGCACAGGCAGCTTCACACACTGCAAAAGGAGAAGAGTGATCGTCTGAAGAAGCTCCAAGAGAACCTGTACAGTTTAAGTTCTCTCTGTTCAGTACTTGGATTGGACTTTAAGCAGACAGTCAGTGAAGTCCATCCTAGTTTAGGAAACTCAGAAGGATCTAAGAGTGTAAATAACGATACCATCAGCCAATTGGCTTTAGCTATACAAGAATTACGAGGAGTGAAATTGCAGAGAATGCAAAAGCTTCAAGATCTAGCAACGTCAATGTTGGAGCTCTGGAATTTGATGGATACACCAATTGAAGAGCAACAGGTATTTCAGAATGTTACTTGTAACATTGCAGCTTCAGAAGATGAAGTAACTGAACCAAACGCCTTGTCTGAGGACTTCATTAATAATGTGGAGACAGAAGTATCTAGATTAGAGGACTTAAAATCAAGCAAAATGAAAGAACTTGTTTTCAAGAAAAGATCAGAGCTAGAGGAGATTTGTAGAAAGACTCATTTGATTCCAGAATTTGATGGTGCGGTCGAATATACTATTGAAGCTATAGAGGCTGGATCTGTAGACCCTGCTTCTGTACTTGAACAAATTGAACTTCAGATTGCCCAAGTCAAAGAGCAAGCTTTTAGTAGAATAGAAATACTTGAAAAGGTTGATAAATGGTTGTCAGCATGTGATGAAGAATCTTGGCTTGAGGAGTACAGCAGgGATGAAAATCGATACAATGCTGGTAGAGGTACTCATCTTAATCTCAAACGAGCTGAGAAAGCACGTGTCTTGGTGAATAAAATTCCAGCAATGACAGACAACTTGATTTCAAAAACAGTAGCATGGGAAAAGGATAAAGGCACTGAGTTCATATATGATAGTGTCCGCCTGCTTTCTATGCTTGAAGACTACAACTTATTACGGCAAGAGAAGGAGCAAGAACGCCGTAGACAGCGGGACATGAAGAAACTTCAGGGACAACTGGTAGCAGAACAGGAAGTATTGTATGGGTCAAAAAGCCCTTCAAAGGCCCAGAGTGCAAGAAAGGCACCTAGGACGCCGAGTGGAAGTACAGGTAGTAGAAGAGGTACCTTTGGAGGATCAATGCTAAAACCTGATTCAAAGCTTGCTCGCTCAAACTCCACAAGGAAGACTGACAGAGTGCACCAAATTGAGGACGATGGCATTTCATGTACATCAGGTACTAGAAGAGGACTTGATAATATTGCTGATATTACTATGAGAAAATACTCATTAGGTGCTGGAATTGTTCCGGATATCAAATCTCCTTTGACACGACAACCTTTTACGACCATCTCTTCGACAATATCATCACAAGAGAATGTGGAAAATATGACAGCTGAATCGAATTTGCAGAAGCAAAAGTTGCTGAAAACATTAGCAATTAACAATTTTCCATtcactactactactactacctCAAAAGCAGAGACAGTTGTAGATGAAGAGAATAGAACTCCAAAGGCAATGCCAATTCCTCCCTCCACTACTACATCAAGGACAGTGTCAATACCTATGAATATGGCCATGACTCCAGCTCCTTTTGGAAGTAATTTGGTTCAAGAAATTGAATATTCCCTTTAG 2091 0.3955 MSKPLSDHPLPQAETTCASLLQELQIIWHEVGESESEKDRMLFEIEQEFLEVYRRKIDRANCSRAQIRQEIADSEAELTAICSAMGERPVHSRQSGQKARSLKEELEMIVPELEEMQKRKHDRRNQFIEVQEQIQSISNEIHCPREIIPFIVDDNDLSLRKLEELHRQLHTLQKEKSDRLKKLQENLYSLSSLCSVLGLDFKQTVSEVHPSLGNSEGSKSVNNDTISQLALAIQELRGVKLQRMQKLQDLATSMLELWNLMDTPIEEQQVFQNVTCNIAASEDEVTEPNALSEDFINNVETEVSRLEDLKSSKMKELVFKKRSELEEICRKTHLIPEFDGAVEYTIEAIEAGSVDPASVLEQIELQIAQVKEQAFSRIEILEKVDKWLSACDEESWLEEYSRDENRYNAGRGTHLNLKRAEKARVLVNKIPAMTDNLISKTVAWEKDKGTEFIYDSVRLLSMLEDYNLLRQEKEQERRRQRDMKKLQGQLVAEQEVLYGSKSPSKAQSARKAPRTPSGSTGSRRGTFGGSMLKPDSKLARSNSTRKTDRVHQIEDDGISCTSGTRRGLDNIADITMRKYSLGAGIVPDIKSPLTRQPFTTISSTISSQENVENMTAESNLQKQKLLKTLAINNFPFTTTTTTSKAETVVDEENRTPKAMPIPPSTTTSRTVSIPMNMAMTPAPFGSNLVQEIEYSL 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03302 696 Coils Coil 459 489 - -
Tsu06g03302 696 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 8 632 - -
Tsu06g03302 696 MobiDBLite consensus disorder prediction 648 669 - -
Tsu06g03302 696 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 8 632 IPR007145 GO:0000226|GO:0008017
Tsu06g03302 696 MobiDBLite consensus disorder prediction 494 555 - -
Tsu06g03302 696 Coils Coil 155 182 - -
Tsu06g03302 696 MobiDBLite consensus disorder prediction 500 526 - -
Tsu06g03302 696 Coils Coil 50 77 - -
Tsu06g03302 696 Pfam Microtubule associated protein (MAP65/ASE1 family) 19 517 - -
Tsu06g03302 696 Gene3D - 366 500 - -
Tsu06g03302 696 MobiDBLite consensus disorder prediction 539 555 - -
Tsu06g03302 696 Coils Coil 113 133 - -
Tsu06g03302 696 Coils Coil 296 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03302 Tsu-Chr6 43847081 43853314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03302 12 518 EF-hand Containing Proteins AT5G62250 56.238 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03302 K16732 - gmx:100777734 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03302 06 43847081 43853314 Tsu06g03302 06 43847081 43853314 ECH
Tsu06g03302 06 43847081 43853314 Tsu01g03158 01 38943613 38949050 PCT