Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03158 ATGTCTACTCCTCAAAAGGATCCACTTTCGCAAGCTGAAACAACTTGTGGATCACTTCTCTATGAACTTCAGatAATATGGGACGAAGTTGGCGAGGCTGAGCCTGACAGAGACAGAATGCTGTTTGAGCTTGAACAAGAGTGTCTTGAAGTGTACAGAAGGAAGGTAGATCAAGCAAATCGGTCTAGAGCTACACTAAGGCAGGCAATTGCTGATTGTGAGGCAGAACTTGCAGCCATCTGTTCCGCAATGGGAGAGCGACCAGTACACATTAGACAGTCTGAACAAAATGCTGGAAGCCTAAAGGAAGAGCATGCACGGATTCTTCCATATTTGGAGGAGATGAAAAAGCAGAAGCTTGAGCGCAGAAATCAATTTATAGAAGTTCAAGAGAAGATTCAAAACATCTCAATTGAGATTTATGGCCCCAAAGAGTATGTTCCTTCCATTGTAGATGAAACTGATTTATCCCTGAGAAAACTTGAAGAATTGCACAGACAACTAAATGCACTTCAAATTGAAAAGAATGATCGCCTAAAGAAGGTTCAGGAGCACCTGTACACATTAAATTCTCTTTGTTCAGTGCTCGGGTTTGACTTTCAGCAGGCAGTCCTGGGAATTCATCCCAGTTTGGGAGACATAGAAGGACCTACTAGTGTTAGCAATGATACAATCCAGGAACTCGCTGTTGCTACACAACAACTACGGGAAATTAAATTACAGAGAATGCAGAAACTCCAAGATCTTGCAACAACAATGTTGGAGCTCTGGAACTTGATGGATACACCTATTGAAGAGCAACAAATGTTTCAGAATGTTACATGTAATATAGCTGCATCAGAAGATGAAATAACTGAACCAAACACCTTGTCCGCCGACTTTATCAATTGTGTGGAGGTGGAAGTATCTAGGTTAGAAGAATTAAAATCCAGCAAAATGAAGGAGCTTGTACTAAAGAAGAGAACAGAGCTGGAGGAGATTTGTCGAAAAACTCATTTGGTTCCAGAAACAGATGGTGCAATTGAATATGCTGTTGAAGCTATAGAATCTGGAGCTGTGGACCCTGCTTGTGTGCTCGAACAGTTTGAGCGTCAGGTTGCCCAAGTTAAAGAGGAAGCTTTGGGTCGAAAAGACATACTTGAAAAGGTAGAGAAATGGCTGGCAGCATGTGATGAAGAGTCTTGGCTTGAGGAGTACAACAGGGATGATAATCGATATAATGCTGGAAGAGGCGCTCATCTTACTCTCAAGCGAGCTGAAAAAGCTCGTGGGTTGGTTAACAAAATTCCAGCAATGGTAGATGTGTTGACTTCAAAAATTTTAGCATGGGAAAAGGAAAGGGGTGTTGAGTTCACATATGATGGTatTCGTCTACTCTCAATGATTGAAGAGTACAATATATTACGGGAAGAGAAAGAGCAAGAACGCCGTAGGCAGCGGGACCTGAAGAAACTTCAGGGACAAATGATAGCGGAACAGGAGGCACTATATGGATCAAAACCAAGCCCATCCAAGCCCCAGAGTGTAAAGAAGGGATCTAGAATGTCAACCGGAGGTGCAGCTAGTAGAAGAGTCTCTCTTGGTGGAGCAATGCTTCAGACTCCAAAACCTGATTCAAAAGCTACTAATTCACGTGCCATGAGAAAGACCGACAAAGTGCATCAATTTGAGCATCAAAGTTACTTGGATGATGGTGCTTCCTGTGTATCATCAGCTAGTAGAAGAGTCTCTCTTGGTGGAGCAATGCTTCAGACTCCAAAACCTGATTCAAAAGCTACTAATTCACGTGCCATGAGAAAAACTGACAAAGTGCATCAATTTGAGCAACAAAGTTACTTGGATGATGGCGCTTCCTGTTTATCACCAGCTCGAAGAGGACTGGATATTGCTGGCATTCCTGTACAAAAACATTCACTTGGTGCTGCTAATGCTCAAGCTCAAGGCATAGAATCCCCTCTGACAAGACAACCTTTTTCTTCCATCTCATCTAACGTATCATCAAAAGCAAATGTGGCAAATGCTGCAAATGAACTTAGCACACCAAAAACAGTGCCCTTCACTAGTCCCTGCAAGGCAATGACTGCGGCTGATGTAGAGAATATAACTCCAAAGGCGATGCCTATTCCTATCCCTGCAACACCTTCAACCGTATCAGTTCCTATGAGCATGGCCTTGACGCCTCTTCCTTCATCAGTTTTGATGAATATGGCCACGACTCCAGTTCCCTCGTCAGCTCCTTTTGGATGTGACATGACTCCAGTCCAAGAGATTGAATATTCCTTCGAGGAAAGAAGACTTGCTCATTATATGCTAGcatga 2319 0.4286 MSTPQKDPLSQAETTCGSLLYELQIIWDEVGEAEPDRDRMLFELEQECLEVYRRKVDQANRSRATLRQAIADCEAELAAICSAMGERPVHIRQSEQNAGSLKEEHARILPYLEEMKKQKLERRNQFIEVQEKIQNISIEIYGPKEYVPSIVDETDLSLRKLEELHRQLNALQIEKNDRLKKVQEHLYTLNSLCSVLGFDFQQAVLGIHPSLGDIEGPTSVSNDTIQELAVATQQLREIKLQRMQKLQDLATTMLELWNLMDTPIEEQQMFQNVTCNIAASEDEITEPNTLSADFINCVEVEVSRLEELKSSKMKELVLKKRTELEEICRKTHLVPETDGAIEYAVEAIESGAVDPACVLEQFERQVAQVKEEALGRKDILEKVEKWLAACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARGLVNKIPAMVDVLTSKILAWEKERGVEFTYDGIRLLSMIEEYNILREEKEQERRRQRDLKKLQGQMIAEQEALYGSKPSPSKPQSVKKGSRMSTGGAASRRVSLGGAMLQTPKPDSKATNSRAMRKTDKVHQFEHQSYLDDGASCVSSASRRVSLGGAMLQTPKPDSKATNSRAMRKTDKVHQFEQQSYLDDGASCLSPARRGLDIAGIPVQKHSLGAANAQAQGIESPLTRQPFSSISSNVSSKANVANAANELSTPKTVPFTSPCKAMTAADVENITPKAMPIPIPATPSTVSVPMSMALTPLPSSVLMNMATTPVPSSAPFGCDMTPVQEIEYSFEERRLAHYMLA 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03158 772 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 687 IPR007145 GO:0000226|GO:0008017
Tsu01g03158 772 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 7 687 - -
Tsu01g03158 772 MobiDBLite consensus disorder prediction 492 552 - -
Tsu01g03158 772 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 507 - -
Tsu01g03158 772 MobiDBLite consensus disorder prediction 500 515 - -
Tsu01g03158 772 Gene3D - 365 499 - -
Tsu01g03158 772 Coils Coil 458 488 - -
Tsu01g03158 772 Coils Coil 161 181 - -
Tsu01g03158 772 Coils Coil 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03158 Tsu-Chr1 38943613 38949050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03158 10 543 EF-hand Containing Proteins AT5G62250 56.985 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03158 K16732 - gmx:100777734 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03302 06 43847081 43853314 Tsu01g03158 01 38943613 38949050 PCT