Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03282 atGGCCCTCGAAACTTTACTCTTAAGAGTAAAAACAGCTTTTTCAAACAGTTTCGACTCAGTTCACAAAACGACACCATCTTCAAAAACAAACCCAAAACGCATCGCCGTTTTAGCTTTCGAAGTCGCCGGAGTTATGTCGAAGCTTCTTCATCTCTGGCAATCACTTTCCGACGCTAATATTGTTCGTCTTCAAAACGACGTCGTTTCACTTGAAGGCGTTTTGAAACTAATCTCAAACGACAAGTCGTTTTTAATCAAACTCGCTATTGCTGAGTTCGCTGACTCACTCCGAGTTGCTTCTGACTCAGTCTCTCGACTCAGTCTCAACTGCAATGACTCAACACTCAGATCTTTCCACCGAGTTTTCACTGAGTTCGCTGACTCGGGATTTGACTCAGTTGGTTGGACTCTCACAACCCCAAAAGAAATTGAATCCAAACATAGAAGAATGGAACGTTACGTGACTCTCACGTTAACTCTTCATAGAGAAATTGATGAGCTTTCACTTTTAGAAAGCACGTTGAGAAAAGCActtctcaacaacaacaacaataccACCAACAACAAAAGCAGAATCAGTGATCTTGAACAAAAGATTTTCTGGCAGAAACAAGAGGTAAAGAATCTTAAAGAAAAATCATTATGGAACAAAGGTTTTGATAATGTTGTTCTGTTATTAGCAAGATTTGTTTTCACTTCGTTAGCAAGAATTAAGGTTGTTTTTGGAATTGGTAATGGAAATGGAAATCATTTACCTTATTTATCACGAAGTTTATCAACTTCTGCTGCTGTTTATCCTTCAGATCATCAAAAAGATCAAAACTTTGTATCTGGGCCGTTGAAAAGTTTCAAACTTGATGATTATTCTTCAGATcataaaaaagttgaaaactttTCATCTGGGCCGTTGAAAAAAGTGGATttaagaaatgggttttttgaTTCAAATTGTAAAGTTTTGAAACCACCACAAGGTAGTTTAGGTGATTCAGCTTTATCATTACATTATGCTAATTTGATTATTGTTAtggaaaaaatgataaaatcacCTCAATTAGTTGGTGTTGATGCAAGAGATGATTTATATGCTATGTTACCAAATAGTATAAGATCATCATTGAGATTAAGGTTAAAAGGGTCAATTGGATTTTGTGCTTGTGATCCTTTATTGGCTAATGAATGGAGAAATGCTTTGGGAAGGATACTTTGTTGGTTGTTACCATTGGCACAAAATATGATTAGGTGGCAAAGTGAAAGAAGTGTTGAAGAGAAAAGATTGGTTCTTAAGAAATCTAATGTGTTGCTtttgcaaactttattttttgctaATAAGGTGAAGACTGAAGCTGCTATAACTGAGTTACTTGTTGGTTTGAATTATATTTGGAAGTTTGAGAGGGAAATGACTGCTAAGGCTTTGTTTGAATGTAACAATGATTTTAATGGGTTTTTAAGTTTGTACAAATCTAGTTAA 1476 0.3347 MALETLLLRVKTAFSNSFDSVHKTTPSSKTNPKRIAVLAFEVAGVMSKLLHLWQSLSDANIVRLQNDVVSLEGVLKLISNDKSFLIKLAIAEFADSLRVASDSVSRLSLNCNDSTLRSFHRVFTEFADSGFDSVGWTLTTPKEIESKHRRMERYVTLTLTLHREIDELSLLESTLRKALLNNNNNTTNNKSRISDLEQKIFWQKQEVKNLKEKSLWNKGFDNVVLLLARFVFTSLARIKVVFGIGNGNGNHLPYLSRSLSTSAAVYPSDHQKDQNFVSGPLKSFKLDDYSSDHKKVENFSSGPLKKVDLRNGFFDSNCKVLKPPQGSLGDSALSLHYANLIIVMEKMIKSPQLVGVDARDDLYAMLPNSIRSSLRLRLKGSIGFCACDPLLANEWRNALGRILCWLLPLAQNMIRWQSERSVEEKRLVLKKSNVLLLQTLFFANKVKTEAAITELLVGLNYIWKFEREMTAKALFECNNDFNGFLSLYKSS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03282 491 Pfam Domain of unknown function (DUF3475) 37 92 IPR021864 GO:0045927
Tsu06g03282 491 Coils Coil 193 213 - -
Tsu06g03282 491 PANTHER BNAC09G50660D PROTEIN 1 490 - -
Tsu06g03282 491 Pfam Protein of unknown function (DUF668) 328 415 IPR007700 GO:0045927
Tsu06g03282 491 PANTHER DUF3475 DOMAIN PROTEIN 1 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03282 Tsu-Chr6 43677510 43679793 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03282 - - mtr:MTR_6g461910 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03282 06 43677510 43679793 Tsu06g03282 06 43677510 43679793 ECH
Tsu06g03282 06 43677510 43679793 Tsu01g03155 01 38915311 38917386 PCT