Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03155 ATGGCTCTTGAAACTCTCCTCTTCAAGGTCAAAACCGCCATTTCAAATAGCTTTGATTCTGTTCCACCAAAGCTTCTAAAAAAGAAACCTTCTTTCAAATCCAAACGAAACGTCGACGTTTTAGCTTTCGAGATCGCTGGTGTTATGTCGAAgcttcttcatctttttcaatCTCTTTCTGATGCAACCATCGTTCGAATCCGAAACGACGCCGTTACGCTTGAAGGTGTTCGGAAAATCATATCAAACGATGAGTCGTTTCTTCTTGGACTGGCTTGTGCTGAGTTTGCTGAGACTCTCCGAATCGTTGCTAACTCGGTTACCCGACTCAGTCACCGATGTGAGGATCCTAATCTTAGGAATTTCCATCGGGCTTTTCTTGAGTTTGCCGATTCGGGCCGTGACCCAAATGGATGGGCTTTTTCTAGCCCAAAGGAAATTGAAACTAAGTTTAGGAAAATGGAACGTTACGTGATGCTTACGGCAACTTTACACCGTGAAATGGAAGAGCTTTCTGTTTTGGAAAATGGGTTTAGAAAAGCTTTGAATTTGAATCATCATCATCGAAATAATCATCATCGTAGTAATAGTTGTGAAGGAAATGAAGGTTCTTTGGGTGTTGGAAAAGAGCAGAAAATTTATGAACTTCAGCAGAAAATTTGTTGGGAGAAACAAGAGGTTAAGGATCTGAAAGATAGATGTTTGTGGAGTAGAAGTTTTGATGGTGTTGTTTTATTACTTGTGAGATTTTGTTTCACTGTTTTAGCAAGGATTAAGGTTGTTTTTGGTATTGGTCATTCTATTCCTTGTTTGTCATCACCTAATTTGTCAGCTTCTGCAACTGTTTATCCAAATTCTTGTCATGAATTTGTTTCTGGGTCATTGGAAAGCTCAGAGCTTGGAGAAAACAAAGAAGGTTTGGGAATTGGGTTTTTTGAGTCAAACTCAAAGCTTTTGAAACCACCTCCTAGTACTTTAGGTGCTGCTGCTTTGGCTTTACATTATTCCAACTTGATTATAGTGTTGGAGAAGATGATAAAGACACCTCATTTGATTGGTTTGGATGCTAGGGATGATTTGTATGGTATGTTACCAAGTAGCATAAGGTCATGTTTAAGGGCTAGGTTGAAAGGAATTGGGTTTTGTGCAAGTGATCCTGTTCTTGCTGGTGAGTGGAAGGATGCTTTGGGGAGGATATTAGGGTGGTTGTCACCTTTGGCACATAACATGATTAAGTGGCAAAGTGAAAGGAGCTTTGAGCAACAAAATTTGGTGCCTAAGACTAATGTTTTGCTTTTGCAGACTTTGTTTTTTGCAAACAAAGAGAAGACTGAAGCTGCTATAACTGAGCTGCTTGTTGGGTTAAATTATATTTGGAGGTTTGAGAGAGAAATGACTGCTAAGGCTTTGTTTGAATGTGCCAATTTCAATGGTTTTATTAAATCTACAAAAACATag 1458 0.3861 MALETLLFKVKTAISNSFDSVPPKLLKKKPSFKSKRNVDVLAFEIAGVMSKLLHLFQSLSDATIVRIRNDAVTLEGVRKIISNDESFLLGLACAEFAETLRIVANSVTRLSHRCEDPNLRNFHRAFLEFADSGRDPNGWAFSSPKEIETKFRKMERYVMLTATLHREMEELSVLENGFRKALNLNHHHRNNHHRSNSCEGNEGSLGVGKEQKIYELQQKICWEKQEVKDLKDRCLWSRSFDGVVLLLVRFCFTVLARIKVVFGIGHSIPCLSSPNLSASATVYPNSCHEFVSGSLESSELGENKEGLGIGFFESNSKLLKPPPSTLGAAALALHYSNLIIVLEKMIKTPHLIGLDARDDLYGMLPSSIRSCLRARLKGIGFCASDPVLAGEWKDALGRILGWLSPLAHNMIKWQSERSFEQQNLVPKTNVLLLQTLFFANKEKTEAAITELLVGLNYIWRFEREMTAKALFECANFNGFIKSTKT 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03155 485 Pfam Protein of unknown function (DUF668) 325 412 IPR007700 GO:0045927
Tsu01g03155 485 Pfam Domain of unknown function (DUF3475) 40 95 IPR021864 GO:0045927
Tsu01g03155 485 PANTHER SIMILARITY TO UNKNOWN PROTEIN 1 477 - -
Tsu01g03155 485 PANTHER BNAC09G50660D PROTEIN 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03155 Tsu-Chr1 38915311 38917386 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03155 - - mtr:MTR_0318s0020 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu06g03282 06 43677510 43679793 Tsu01g03155 01 38915311 38917386 PCT