Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03094 ATGTCTGGTAGAGATCTAGAGAGAGAAGGGGCAAACAAGAACAATTATGTTCCTCCACATGTTTATGATTCTGAAACTAGTTGGACATCATGGCTTATTCCTTTCTTTGTTGTTGCTAatcttgttgtttttgttttagctATGTATATTAATAATTGTCCTAGTAAAAATCTTGGTTTTCAAGGTGATTGTGTTTTAAAGATTCTTGGAAGATTCTCTTTTCAGCCTCTTAGAGAGAATCCTTTGTTTGGTCCTTCTTCTTCAACACTAACGAAGATGGGAGCCCTTAAGTGGGATGATGTTGTGAATCATCACCAAGGATGGAGACTTGTGACGTGCATTTGGTTACATGCTGGAATTATTCATTTGGCAGCAAACATGATTAGTCTGGTCTTCATTGGCATTCGCCTTGAACAACAATTTGGGTTCGTGAGGATAGGAATCATTTACCTAGTATCTGGATTCGGTGGGAGTGTACTGTCTTCTCTATTCATTAGAAACAACATCTCCGTTGGTGCTTCGGGCGCTCTATTTGGACTTCTTGGAGCAATGCTTTCAGAACTTATTACAAACTGGAGTATTTATACCAATAAAGTAGCTGCTTTGATCACACTTCTGTTTATTATCGTCATCAATCTTGCGATTGGAATGTTGCCACATGTTGACAATTTTGCACATATTGGGGGATTCCTGACGGGCTTTCTCCTTGGTTTCATTTTCCTTCCCCGTCCTCAATTTGGGTGGTTAGCGCAGCGACATGTTCCTGCTGGTGCTCGCCTCAAATCCAAGTACAAGGTTTACCAATATGTTCTATGGATTGTATCTGTTATTCTATTGATTGCCGGGTTATGCATTGCTTTAGTTATGCTATTACGAGGCGAAAACGGATATGACCACTGCCACTGGTGTCGGTATCTAACATGTGTTCCAACTTCTAAATGGAAATGCGATGACAGTTAA 960 0.3937 MSGRDLEREGANKNNYVPPHVYDSETSWTSWLIPFFVVANLVVFVLAMYINNCPSKNLGFQGDCVLKILGRFSFQPLRENPLFGPSSSTLTKMGALKWDDVVNHHQGWRLVTCIWLHAGIIHLAANMISLVFIGIRLEQQFGFVRIGIIYLVSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELITNWSIYTNKVAALITLLFIIVINLAIGMLPHVDNFAHIGGFLTGFLLGFIFLPRPQFGWLAQRHVPAGARLKSKYKVYQYVLWIVSVILLIAGLCIALVMLLRGENGYDHCHWCRYLTCVPTSKWKCDDS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03094 319 SUPERFAMILY Rhomboid-like 29 245 IPR035952 -
Tsu06g03094 319 Pfam Rhomboid family 103 244 IPR022764 GO:0004252|GO:0016021
Tsu06g03094 319 PANTHER RHOMBOID-RELATED 1 318 IPR002610 GO:0004252|GO:0006508|GO:0016021
Tsu06g03094 319 PANTHER RHOMBOID-LIKE PROTEIN 3 1 318 - -
Tsu06g03094 319 Gene3D - 28 243 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03094 Tsu-Chr6 40736127 40740038 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03094 - - gmx:100813345 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04459 01 52273512 52275416 Tsu06g03094 06 40736127 40740038 ECH
Tsu06g03094 06 40736127 40740038 Tsu06g03094 06 40736127 40740038 ECH