Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03092 ATGCCAAATTCACCAAAACCCTTCAAACCCTCTAAATCCAACTCATTTTTTAActgcaaaaaaacaaatctttacTCTTTTTTAGCTCTTCTTTGCATCCTTTCCTATCTCTTAGGTTCATACCAAAATACCCCaaccacaaacacaaacacaaccaAAACCAACACAAGCAAAAAtcttcaaaacaacaaaatcacaTCACAATGTATCCAACAAAACccaaatcaaaaaataaaaacaacaaaacaaaatcaaaaaacaaaaacaacccaCTTAGATTTCTTCTCACACCACAACATAACAGACCCAACAACCTCAACTTCATCAACATCTTCACAAACTCATCATTATCCATCCTGCACCCCCAAATTAACAGACTACACCCCATGTGAAGACCACGCGCGATCCTTAAAATACACGCGCGACAAAATGATTTATAGAGAAAGACACTGTCCTAAGAAAAATGAGATACTAAAGTGTCGTGTTCCAGCACCAAATGGTTATAAGAATCCATTTCCATGGCCTATAAGTAGAGATATGGCTTGGTATGCTAATGTACCTTATCGTCATTTAACAGTAGAAAAAgctgtgcaaaattggattcgTTTTGATGGTGATAGATTCCGTTTTCCTGGTGGTGGTACTATGTTTCCAAATGGTGCTGATAAATATATTGATGATATTGCTAAGCTTATTAATCTTCATGATGGTTCTGTTAGAACTGCTGTTGATACTGGTTGTGGGGTTGCTAGTTGGGGAGCATATCTTCTATCACGTGACATATTAACAGTGTCAATTGCACCAAGAGACACTCATGAAGCACAAGTTCAATTTGCACTTGAAAGAGGTGTTCCTGCAATTATTGGTGTCTTAGCCTCAAAAAGATTGCCTTTCCCTTCTAGAGCTTTTGATATGGCACATTGTTCTCGTTGCCTTATTCCTTGGGCTGAATATGATGGACTTTATCTAAATGAAGTTGATAGAATTCTACGTCCTGGTGGGTATTGGATTTTATCTGGTCCACCAATTCATTGGAAGAAATATTGGAAAGGATGGGAAAGAACAAAGGAAGATTTGAATGAAGAACAAACCAAAATTGAGAATGTAGCTAAAAGCCTTTGTTGGAACAAGTTAGTTGAGAAAGGTGATATTGCTATTTggcaaaaacccaaaaatcatttGGGTTGCAAATTCACTCAAAAAAATAGACCTTTTTGCCAAGAGCAGAGTAACCCTGACAAAGCTTGGTACACAAACATGCAAACATGTTTAAATCCACTTCCTGAAGTGTCCAACAAAGAAGAAACATCTGGTGGAACATTAAACAATTGGCCACAAAGACTAAAATCAACCCCACCAAGGATTTCAAAAGGAACCATAAAAAGTGTTACACCACAAACATTCTCAAAAGACAATGAATTATGGAACAAAAGAATATCATATTACAAAAAAGTTAATAATCAACTTGGAAAAGCTGGTAGATACCGCAACTTATTAGACATGAATGCTTATTTAGGTGGATTTGCAGCTTCACTAGTTAAATATCCTATTTGGGTTATGAATGTGGTTCCTATTCAAGCTAAAGTTGATACACTTGGAGCAATTTATGAAAGAGGCTTGATTGGAATGTATCACAATTGGTTAGTGTTGTAA 1653 0.3315 MPNSPKPFKPSKSNSFFNCKKTNLYSFLALLCILSYLLGSYQNTPTTNTNTTKTNTSKNLQNNKITSQCIQQNPNQKIKTTKQNQKTKTTHLDFFSHHNITDPTTSTSSTSSQTHHYPSCTPKLTDYTPCEDHARSLKYTRDKMIYRERHCPKKNEILKCRVPAPNGYKNPFPWPISRDMAWYANVPYRHLTVEKAVQNWIRFDGDRFRFPGGGTMFPNGADKYIDDIAKLINLHDGSVRTAVDTGCGVASWGAYLLSRDILTVSIAPRDTHEAQVQFALERGVPAIIGVLASKRLPFPSRAFDMAHCSRCLIPWAEYDGLYLNEVDRILRPGGYWILSGPPIHWKKYWKGWERTKEDLNEEQTKIENVAKSLCWNKLVEKGDIAIWQKPKNHLGCKFTQKNRPFCQEQSNPDKAWYTNMQTCLNPLPEVSNKEETSGGTLNNWPQRLKSTPPRISKGTIKSVTPQTFSKDNELWNKRISYYKKVNNQLGKAGRYRNLLDMNAYLGGFAASLVKYPIWVMNVVPIQAKVDTLGAIYERGLIGMYHNWLVL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03092 550 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 148 350 IPR029063 -
Tsu06g03092 550 PANTHER METHYLTRANSFERASE PMT15-RELATED 13 547 - -
Tsu06g03092 550 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 13 547 IPR004159 GO:0008168
Tsu06g03092 550 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 126 547 IPR004159 GO:0008168
Tsu06g03092 550 Gene3D Vaccinia Virus protein VP39 194 386 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03092 Tsu-Chr6 40691442 40700404 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03092 - - gmx:100777356 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04465 01 52297404 52306378 Tsu06g03092 06 40691442 40700404 ECH
Tsu06g03092 06 40691442 40700404 Tsu06g03092 06 40691442 40700404 ECH